Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MSI1O43347 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MSI1O43347 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MSI1O43347 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.09□□□□□ -1.43
MSI1O43347 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.09□□□□□ -1.43
MSI1O43347 RNA5SP122-201ENST00000384457 108 ntBASIC6.09□□□□□ -1.43
MSI1O43347 RNA5SP284-201ENST00000384547 118 ntBASIC6.09□□□□□ -1.43
MSI1O43347 UBE2V1P15-201ENST00000407776 448 ntBASIC6.09□□□□□ -1.43
MSI1O43347 EEF1B2P8-201ENST00000414101 671 ntBASIC6.09□□□□□ -1.43
MSI1O43347 OR5W1P-201ENST00000423705 938 ntBASIC6.09□□□□□ -1.43
MSI1O43347 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 HSFY7P-201ENST00000432672 318 ntBASIC6.09□□□□□ -1.43
MSI1O43347 HSFY8P-201ENST00000437934 318 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AC023141.8-201ENST00000442554 208 ntBASIC6.09□□□□□ -1.43
MSI1O43347 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.09□□□□□ -1.43
MSI1O43347 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.09□□□□□ -1.43
MSI1O43347 HSFY5P-201ENST00000453726 309 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.09□□□□□ -1.43
MSI1O43347 AC007998.1-201ENST00000474156 672 ntBASIC6.09□□□□□ -1.43
MSI1O43347 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 AC106806.2-201ENST00000509365 500 ntBASIC6.09□□□□□ -1.43
MSI1O43347 GAPDHP71-201ENST00000511530 1003 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 MIR2117-201ENST00000516780 80 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 HMGN2P36-201ENST00000529541 409 ntBASIC6.09□□□□□ -1.43
MSI1O43347 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.09□□□□□ -1.43
MSI1O43347 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.09□□□□□ -1.43
MSI1O43347 AL049779.3-201ENST00000557141 606 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.09□□□□□ -1.43
MSI1O43347 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.09□□□□□ -1.43
MSI1O43347 AC015802.2-201ENST00000589690 189 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AC040174.2-201ENST00000602701 465 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AC098483.2-201ENST00000603158 454 ntBASIC6.09□□□□□ -1.43
MSI1O43347 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.09□□□□□ -1.43
MSI1O43347 BNIP3P35-201ENST00000604530 490 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AL049840.6-201ENST00000604583 345 ntBASIC6.09□□□□□ -1.43
MSI1O43347 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.09□□□□□ -1.43
MSI1O43347 AL445670.1-201ENST00000618889 801 ntBASIC6.09□□□□□ -1.43
MSI1O43347 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.09□□□□□ -1.43
MSI1O43347 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.09□□□□□ -1.43
MSI1O43347 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
MSI1O43347 AC087516.1-201ENST00000561236 2428 ntBASIC6.09□□□□□ -1.43
MSI1O43347 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
MSI1O43347 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.09□□□□□ -1.44
MSI1O43347 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.09□□□□□ -1.44
MSI1O43347 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.09□□□□□ -1.44
MSI1O43347 AC007998.4-201ENST00000612496 2533 ntBASIC6.08□□□□□ -1.44
MSI1O43347 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 AL512283.1-201ENST00000606756 1384 ntBASIC6.08□□□□□ -1.44
MSI1O43347 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSI1O43347 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 AL589655.1-201ENST00000405398 482 ntBASIC6.08□□□□□ -1.44
MSI1O43347 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 MTND2P15-201ENST00000418575 892 ntBASIC6.08□□□□□ -1.44
MSI1O43347 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 MTND6P12-201ENST00000428247 522 ntBASIC6.08□□□□□ -1.44
MSI1O43347 RPL23AP19-201ENST00000436229 369 ntBASIC6.08□□□□□ -1.44
MSI1O43347 AL606490.8-201ENST00000441624 319 ntBASIC6.08□□□□□ -1.44
MSI1O43347 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 VN1R48P-201ENST00000448149 1036 ntBASIC6.08□□□□□ -1.44
MSI1O43347 AL353718.1-201ENST00000451028 517 ntBASIC6.08□□□□□ -1.44
MSI1O43347 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 C1DP3-201ENST00000455013 423 ntBASIC6.08□□□□□ -1.44
MSI1O43347 AC004129.2-201ENST00000457229 287 ntBASIC6.08□□□□□ -1.44
MSI1O43347 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.08□□□□□ -1.44
MSI1O43347 SNRPCP3-201ENST00000474888 476 ntBASIC6.08□□□□□ -1.44
MSI1O43347 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MSI1O43347 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MSI1O43347 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.08□□□□□ -1.44
MSI1O43347 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 LINC00557-201ENST00000563184 1279 ntBASIC6.08□□□□□ -1.44
MSI1O43347 MIR3614-201ENST00000581261 86 ntBASIC6.08□□□□□ -1.44
MSI1O43347 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.08□□□□□ -1.44
MSI1O43347 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.08□□□□□ -1.44
MSI1O43347 OR7M1P-201ENST00000608946 533 ntBASIC6.08□□□□□ -1.44
MSI1O43347 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.08□□□□□ -1.44
MSI1O43347 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.08□□□□□ -1.44
MSI1O43347 AC069234.4-201ENST00000621276 412 ntBASIC6.08□□□□□ -1.44
MSI1O43347 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSI1O43347 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSI1O43347 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 AC068446.1-201ENST00000556425 1549 ntBASIC6.08□□□□□ -1.44
MSI1O43347 AC232271.1-201ENST00000602455 2715 ntBASIC6.08□□□□□ -1.44
MSI1O43347 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.08□□□□□ -1.44
MSI1O43347 NLRP3P1-201ENST00000622303 1785 ntBASIC6.08□□□□□ -1.44
MSI1O43347 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
MSI1O43347 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MSI1O43347 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms