Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AGGF1P7-201ENST00000562369 913 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AC096996.1-201ENST00000563813 325 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.51□□□□□ -1.53
SLC28A1O00337 DHFRP1-201ENST00000579682 559 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC108673.3-201ENST00000609183 335 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 MIR6793-201ENST00000612376 63 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 MIR6813-201ENST00000621638 56 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.51□□□□□ -1.53
SLC28A1O00337 AL022311.1-201ENST00000623726 19416 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 AC005261.6-201ENST00000623072 1387 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SLC28A1O00337 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SLC28A1O00337 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SLC28A1O00337 OR4F13P-202ENST00000560066 2054 ntBASIC5.51□□□□□ -1.53
SLC28A1O00337 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC092111.2-201ENST00000611627 1414 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC092681.1-201ENST00000297369 291 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 RNU6-1331P-201ENST00000363658 106 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SLC28A1O00337 MIR130A-201ENST00000385274 89 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC096921.1-201ENST00000411661 375 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 VN1R31P-201ENST00000417498 730 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 NIFKP3-201ENST00000417799 865 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 AL354766.1-201ENST00000423396 542 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 RPS27AP6-201ENST00000427962 448 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC28A1O00337 VN1R110P-201ENST00000438988 971 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC28A1O00337 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC28A1O00337 OR6C72P-201ENST00000451403 892 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 PPIAP27-201ENST00000453800 265 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC093166.4-201ENST00000457867 318 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 CTSLP6-201ENST00000458273 1002 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 RN7SL570P-201ENST00000484405 292 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 RPS17P5-201ENST00000498293 408 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC139365.2-201ENST00000517972 253 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 PCNAP4-201ENST00000532690 730 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC006530.1-201ENST00000555980 571 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 OR1E3-201ENST00000575608 948 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.5□□□□□ -1.53
SLC28A1O00337 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC092944.2-201ENST00000605443 889 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AP001437.1-201ENST00000608783 456 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AC007786.3-201ENST00000615154 596 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 AC090607.5-201ENST00000615692 224 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.5□□□□□ -1.53
SLC28A1O00337 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 CASC19-274ENST00000642018 970 ntBASIC5.5□□□□□ -1.53
SLC28A1O00337 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SLC28A1O00337 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.5□□□□□ -1.53
SLC28A1O00337 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SLC28A1O00337 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC28A1O00337 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.49□□□□□ -1.53
SLC28A1O00337 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC28A1O00337 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC28A1O00337 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC28A1O00337 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms