Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP000797.2-201ENST00000475768 606 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL809P-201ENST00000482040 297 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL447P-201ENST00000494711 245 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 CHCHD2P7-201ENST00000508008 452 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 RPL37-205ENST00000509877 637 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR2117-201ENST00000516780 80 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 GLYCAM1-204ENST00000550226 781 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 TPRX1P1-201ENST00000557620 319 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MTCYBP13-201ENST00000578634 1093 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR4786-201ENST00000583954 80 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 ACTG1P22-201ENST00000603793 1099 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AL355974.3-201ENST00000617383 467 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PART1_3.1-201ENST00000619680 131 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AP000648.2-201ENST00000624182 404 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC055839.1-201ENST00000634467 498 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR665-201ENST00000635949 72 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC138627.1-204ENST00000641894 765 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 ALB-220ENST00000621628 1606 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC093909.5-201ENST00000621839 1799 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHKB-CPT1BH3BT56 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 ASNSP1-201ENST00000518311 1939 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AL121886.1-201ENST00000358609 435 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RNU4-81P-201ENST00000363561 144 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RNU6-729P-201ENST00000384399 107 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 SNORD56.6-201ENST00000384569 71 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SKP268-201ENST00000411107 316 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC009237.10-201ENST00000414112 510 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RPL19P16-201ENST00000433839 588 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 PPIAP10-201ENST00000438675 458 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC234771.4-201ENST00000441416 730 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 SAP18P3-201ENST00000449663 396 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AL591438.2-201ENST00000452635 691 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 TCEAL4P1-201ENST00000453620 588 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC010469.1-201ENST00000463864 576 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AP002884.1-201ENST00000479691 655 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL267P-201ENST00000485107 261 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RPL21P42-201ENST00000488408 464 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 PRELID3BP7-201ENST00000503606 469 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC006070.1-201ENST00000508151 193 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 ENPP7P3-201ENST00000509123 241 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 AC106774.2-201ENST00000510266 406 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 Y_RNA.710-201ENST00000516975 110 ntBASIC2.98□□□□□ -1.93
CHKB-CPT1BH3BT56 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms