Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 RNA5SP326-201ENST00000363209 110 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC096921.1-201ENST00000411661 375 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 BX276092.6-201ENST00000430476 250 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AK3P5-201ENST00000432033 519 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 ARL5AP3-201ENST00000439327 386 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 BX276092.8-201ENST00000455722 250 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 RNU1-88P-201ENST00000459274 128 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC092865.4-201ENST00000477936 615 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 GAPDHP62-201ENST00000515313 990 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC139365.2-201ENST00000517972 253 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC006530.1-201ENST00000555980 571 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 MIR4502-201ENST00000580432 81 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AP003117.1-201ENST00000602771 554 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL049840.6-201ENST00000604583 345 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AC092266.1-201ENST00000610958 165 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 AL139099.4-201ENST00000614802 114 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 QRSL1P1-201ENST00000400977 1540 ntBASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TCRBV7S3A2A0A539 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC109446.4-201ENST00000623235 2755 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC092451.3-201ENST00000625067 1343 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 MIR365B-201ENST00000362317 111 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RNA5SP514-201ENST00000363717 111 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RNA5SP500-201ENST00000364486 119 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RPL11P3-201ENST00000395256 523 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AL357752.1-201ENST00000412817 349 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC098592.2-201ENST00000413158 265 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 DEFA9P-201ENST00000433042 285 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 Z83838.1-202ENST00000456225 839 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 CST12P-201ENST00000457644 362 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC098847.1-201ENST00000473094 348 ntBASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.86□□□□□ -1.47
TCRBV7S3A2A0A539 RPS7P6-201ENST00000485777 579 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms