Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AL158152.1-201ENST00000602652 1435 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AL355488.2-201ENST00000609909 2850 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 U3.23-201ENST00000391132 200 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 MTND6P12-201ENST00000428247 522 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AL512637.1-201ENST00000439523 1231 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 HLA-DPA3-207ENST00000454398 229 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC026348.1-201ENST00000462549 1053 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC126175.1-201ENST00000617041 758 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 AC241377.1-201ENST00000619797 406 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.9□□□□□ -1.3
CTNNA3Q9UI47 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.9□□□□□ -1.31
CTNNA3Q9UI47 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AC087752.1-201ENST00000391360 558 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 RN7SKP17-201ENST00000411242 351 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AL354766.1-201ENST00000423396 542 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AL161636.2-201ENST00000445179 927 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 OR7E116P-201ENST00000448529 957 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AP006222.1-205ENST00000450734 457 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 MEMO1P4-201ENST00000453590 386 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AC011476.1-201ENST00000466725 307 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 RN7SL570P-201ENST00000484405 292 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AC006499.4-201ENST00000510947 694 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 RPL7L1P4-201ENST00000513004 707 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 AC126615.2-201ENST00000553003 515 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 MIR6826-201ENST00000617808 98 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 CR788268.1-201ENST00000603931 1809 ntBASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CTNNA3Q9UI47 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC138907.8-201ENST00000623981 2256 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 NEPNP-201ENST00000404786 1371 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 TMSB4XP4-201ENST00000323496 618 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 RPS3AP2-201ENST00000407190 754 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AL357752.1-201ENST00000412817 349 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 CLUHP1-201ENST00000435012 1190 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 MYO5BP2-201ENST00000449815 1277 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 NENFP3-201ENST00000503735 313 ntBASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.88□□□□□ -1.31
CTNNA3Q9UI47 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 429.3 ms