Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 MIR4420-201ENST00000583944 77 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AL589674.2-201ENST00000604304 337 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AL021707.7-201ENST00000607991 416 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AL691477.1-201ENST00000624398 162 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 MT-RNR2-201ENST00000387347 1559 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 RN7SKP28-201ENST00000364770 305 ntBASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 AC012075.1-201ENST00000436549 580 ntBASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 RN7SL188P-201ENST00000469842 285 ntBASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 BNIP3P32-201ENST00000600015 554 ntBASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 AC016745.2-201ENST00000608834 3443 ntBASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.53□□□□□ -1.2
NPC1L1Q9UHC9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.52□□□□□ -1.2
NPC1L1Q9UHC9 MAPK10-261ENST00000641050 3109 ntBASIC7.52□□□□□ -1.2
NPC1L1Q9UHC9 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
NPC1L1Q9UHC9 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
NPC1L1Q9UHC9 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.52□□□□□ -1.2
NPC1L1Q9UHC9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 MIR551A-201ENST00000385042 96 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 CYCSP51-201ENST00000443545 318 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 RANP1-206ENST00000455094 651 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AC008410.1-201ENST00000483777 339 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AC091912.1-201ENST00000511351 248 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AC136777.2-201ENST00000522979 358 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 OR4A17P-201ENST00000526032 904 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AP000864.1-201ENST00000609424 650 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AC011933.2-201ENST00000578539 2790 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 MSL3P1-202ENST00000440028 1468 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 PRNCR1-201ENST00000635449 12727 ntBASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NPC1L1Q9UHC9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC053481.2-202ENST00000582394 1500 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 RN7SKP185-201ENST00000362813 326 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 RPSAP35-201ENST00000413753 818 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 BX276092.6-201ENST00000430476 250 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 BX276092.8-201ENST00000455722 250 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC011225.1-201ENST00000457751 369 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 RN7SL515P-201ENST00000463999 297 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 RPL35AP19-201ENST00000469425 329 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 GLUD1P3-202ENST00000508551 200 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC109481.1-201ENST00000509173 282 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 OR8Q1P-201ENST00000526467 655 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC132068.1-201ENST00000623805 459 ntBASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
NPC1L1Q9UHC9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms