Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
USP35Q9P2H5 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.4□□□□□ -1.07
USP35Q9P2H5 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
USP35Q9P2H5 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.4□□□□□ -1.07
USP35Q9P2H5 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 SNORA58B-201ENST00000364259 136 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AL132875.1-201ENST00000403623 949 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC234781.4-201ENST00000419384 244 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 MTCYBP7-201ENST00000419540 1134 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 MTND4LP13-201ENST00000425022 298 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 BX119321.1-201ENST00000428912 797 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 VN1R38P-201ENST00000450265 887 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AP006245.2-201ENST00000522004 300 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC079600.1-201ENST00000550326 297 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC005899.7-201ENST00000618199 588 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC253576.2-201ENST00000618815 580 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AL445493.3-201ENST00000619568 477 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC096708.4-201ENST00000620563 552 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 OR5AC4P-202ENST00000642086 985 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 SPATA2P1-201ENST00000431223 2055 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC8.39□□□□□ -1.07
USP35Q9P2H5 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC003973.3-201ENST00000624863 2822 ntBASIC8.39□□□□□ -1.07
USP35Q9P2H5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC007114.2-201ENST00000576014 4281 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 MIR1203-201ENST00000408812 85 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 RN7SL326P-201ENST00000477493 296 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 MTCO1P31-201ENST00000506355 492 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC010468.3-201ENST00000508225 458 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC021146.7-201ENST00000509604 775 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC112206.4-201ENST00000515142 405 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 TMEM97P2-201ENST00000517841 403 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC092451.2-201ENST00000538746 658 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 HNRNPCP1-201ENST00000556181 766 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC090651.1-201ENST00000567865 634 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 AP005119.1-201ENST00000580956 292 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 MIR1273E-201ENST00000581165 102 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC090616.1-201ENST00000583895 447 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AC090236.2-201ENST00000587933 1101 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AL356608.1-201ENST00000610034 820 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AL645927.2-201ENST00000618350 349 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 AP006248.3-201ENST00000623580 594 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 AF287957.1-201ENST00000607368 1595 ntBASIC8.38□□□□□ -1.07
USP35Q9P2H5 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
USP35Q9P2H5 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
USP35Q9P2H5 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms