Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MTND1P35-201ENST00000526739 508 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AP004245.1-201ENST00000530434 259 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AL591767.2-201ENST00000554984 173 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC130651.2-201ENST00000573856 536 ntTSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MXRA7-205ENST00000588114 521 ntAPPRIS ALT2 TSL 4 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC008474.1-201ENST00000589127 573 ntTSL 4 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC060780.3-201ENST00000589464 80 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC091982.3-201ENST00000603996 1115 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MIR98-201ENST00000606724 119 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 uc_338.30-201ENST00000612038 168 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AP006248.2-201ENST00000623309 592 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC091905.1-201ENST00000624400 311 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 LINC00506-204ENST00000630120 587 ntTSL 4 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MIR3160-2-201ENST00000637870 81 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AL512504.2-201ENST00000445455 1909 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL592148.3-201ENST00000608771 2646 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 RNU6-761P-201ENST00000384148 107 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 IGLV3-19-201ENST00000390309 377 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 PDCL3P5-201ENST00000398028 722 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL603766.1-201ENST00000407763 664 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC127391.1-201ENST00000411737 98 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC073136.2-201ENST00000417282 849 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 RPL7P57-201ENST00000423238 740 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC079807.1-201ENST00000429993 481 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 RPL12P15-201ENST00000433385 499 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC092601.1-201ENST00000444526 383 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 ARL2BPP7-201ENST00000446421 490 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC073465.3-201ENST00000448468 405 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 WBP1LP1-201ENST00000460451 896 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 RPL10AP3-201ENST00000462503 651 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL133368.1-201ENST00000486273 814 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC105416.1-201ENST00000506991 842 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC226119.2-201ENST00000513501 530 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 ANKRD46-203ENST00000519316 713 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 GS1-24F4.2-202ENST00000531701 380 ntTSL 3 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC012146.2-201ENST00000576545 416 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 PHBP20-201ENST00000603694 818 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC092681.3-201ENST00000609463 678 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AL133173.2-201ENST00000614270 90 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC009159.1-201ENST00000618386 642 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 CTAGE11P-201ENST00000451540 2353 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RTN4Q9NQC3 AC130650.2-201ENST00000618736 2403 ntBASIC9.8□□□□□ -0.84
RTN4Q9NQC3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms