Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 RNU1-150P-201ENST00000362491 162 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 RN7SKP292-201ENST00000365522 317 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 MIR433-201ENST00000384837 93 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC087752.1-201ENST00000391360 558 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 RPL23AP18-201ENST00000416139 468 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 CYP4F30P-202ENST00000420048 405 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC013262.1-201ENST00000426710 252 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 MTCO1P51-201ENST00000427672 1060 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL445466.1-201ENST00000448432 357 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AP006222.1-205ENST00000450734 457 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 OR7E13P-201ENST00000526052 910 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC125612.1-201ENST00000547580 377 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL512310.9-201ENST00000553311 948 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL121839.1-201ENST00000556233 1185 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 BNIP3P38-201ENST00000601117 544 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL136131.3-201ENST00000607600 188 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC018690.1-201ENST00000608144 626 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 MIR6768-201ENST00000610734 72 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC024255.1-201ENST00000614376 102 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC126175.1-201ENST00000617041 758 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC027279.4-201ENST00000624371 2072 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
VTA1Q9NP79 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 GNL2P1-201ENST00000451274 2190 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC015689.2-201ENST00000528172 1738 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 MIR16-2-201ENST00000362117 81 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 TAF9BP2-201ENST00000400856 499 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AL096829.1-201ENST00000413677 457 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 TATDN1P1-201ENST00000414123 891 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 PCBP2P1-201ENST00000437262 977 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AL355355.1-201ENST00000442900 793 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC008379.1-201ENST00000463655 464 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC093719.1-201ENST00000480427 441 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 NAMPTP2-201ENST00000505629 1115 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms