Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 NEK2P4-201ENST00000425793 1329 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL512329.1-201ENST00000404600 1592 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 LINC01616-201ENST00000561816 2280 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 FAM133CP-201ENST00000332869 704 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 OR10D1P-201ENST00000355343 936 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 PPIAP26-201ENST00000377951 522 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 RAP1BP3-201ENST00000407180 549 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL353572.1-201ENST00000442490 417 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 BUD31P2-201ENST00000449374 300 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL354714.5-201ENST00000450131 590 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 MEF2AP1-201ENST00000454867 863 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 EIF3LP2-201ENST00000457262 807 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL492P-201ENST00000460700 295 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC022730.1-201ENST00000473114 568 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 BZW1P2-201ENST00000473537 826 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 SYPL1P1-201ENST00000473622 768 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC022336.1-201ENST00000475510 337 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC074386.1-206ENST00000487102 761 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC108475.1-201ENST00000507880 950 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 RNU6-319P-201ENST00000516025 108 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 MTND4LP18-201ENST00000526864 291 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 MTCYBP41-201ENST00000528913 1123 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AP002004.1-206ENST00000532441 876 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 PHBP2-201ENST00000532859 806 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 PCNPP1-201ENST00000552501 511 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 FXNP1-201ENST00000555153 337 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 PPIAP6-201ENST00000557078 499 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 CTSLP2-201ENST00000580501 394 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 RN7SL32P-201ENST00000580514 281 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 RPS27AP19-201ENST00000597285 458 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC078795.2-201ENST00000602835 1252 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL020997.3-201ENST00000602843 359 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC005377.1-201ENST00000605126 456 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AL445423.1-201ENST00000609941 536 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 MIR6070-201ENST00000613967 103 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC007671.1-201ENST00000616957 830 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC120057.5-201ENST00000623840 154 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC019080.5-201ENST00000624891 757 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 ZNF90P1-201ENST00000480493 1951 ntBASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.03□□□□□ -1.44
SEC61A2Q9H9S3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SEC61A2Q9H9S3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SEC61A2Q9H9S3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SEC61A2Q9H9S3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.02□□□□□ -1.44
SEC61A2Q9H9S3 AL512310.3-201ENST00000547023 1335 ntBASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 AC005832.2-201ENST00000538921 1430 ntBASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 AL359715.4-201ENST00000606629 1436 ntBASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 AL355377.1-201ENST00000621125 1653 ntBASIC6.02□□□□□ -1.45
SEC61A2Q9H9S3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms