Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 RN7SKP28-201ENST00000364770 305 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 KATNBL1P2-201ENST00000433311 835 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AC011225.1-201ENST00000457751 369 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AC139697.1-201ENST00000548429 745 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 SUGT1P3-202ENST00000604259 383 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AC010245.2-201ENST00000606908 1167 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 AC005840.5-201ENST00000619166 599 ntBASIC6.11□□□□□ -1.43
NXF3Q9H4D5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.11□□□□□ -1.43
NXF3Q9H4D5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 GAPDHP24-201ENST00000328713 983 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 RNA5SP319-201ENST00000362768 119 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 RPL35AP24-201ENST00000413846 330 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AL355433.1-201ENST00000422804 300 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 VN1R21P-201ENST00000426703 765 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 OR6D1P-201ENST00000436165 939 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AL390879.1-201ENST00000439143 386 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 RSU1P1-201ENST00000453416 441 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 MEMO1P4-201ENST00000453590 386 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 RPS7P6-201ENST00000485777 579 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 EIF1P7-201ENST00000487533 337 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 RN7SKP67-201ENST00000515905 235 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 OR4A6P-201ENST00000534364 970 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 MIR4311-201ENST00000580794 100 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 NPM1P45-201ENST00000583151 559 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AC012616.1-201ENST00000600294 197 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AC025574.2-201ENST00000615621 514 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AL118522.2-201ENST00000616045 615 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AC132068.1-201ENST00000623805 459 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 AL161912.4-201ENST00000623889 2468 ntBASIC6.1□□□□□ -1.43
NXF3Q9H4D5 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
NXF3Q9H4D5 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.09□□□□□ -1.43
NXF3Q9H4D5 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 RNU1-59P-201ENST00000364829 162 ntBASIC6.09□□□□□ -1.43
NXF3Q9H4D5 RNU6-171P-201ENST00000384354 107 ntBASIC6.09□□□□□ -1.43
NXF3Q9H4D5 RN7SKP278-201ENST00000410504 342 ntBASIC6.09□□□□□ -1.43
NXF3Q9H4D5 BMS1P13-201ENST00000417301 885 ntBASIC6.09□□□□□ -1.43
NXF3Q9H4D5 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.09□□□□□ -1.43
NXF3Q9H4D5 H3F3BP1-201ENST00000440551 403 ntBASIC6.09□□□□□ -1.43
NXF3Q9H4D5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms