Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 ATP5LP5-201ENST00000483050 299 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 DUTP7-201ENST00000507982 486 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 MIR4311-201ENST00000580794 100 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AL360012.1-201ENST00000602813 131 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC027279.4-201ENST00000624371 2072 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC239868.2-201ENST00000564237 4527 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 OR52B3P-201ENST00000314715 928 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 GAPDHP24-201ENST00000328713 983 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 MIR375-201ENST00000362103 64 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 RN7SKP185-201ENST00000362813 326 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 IPPKP1-201ENST00000422501 768 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 BX276092.6-201ENST00000430476 250 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC099670.2-201ENST00000435130 321 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC013410.1-201ENST00000436223 1232 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 BX276092.8-201ENST00000455722 250 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC090589.1-201ENST00000473109 362 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC007998.1-201ENST00000474156 672 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 MRPS16P1-201ENST00000523462 412 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 HMGB1P42-201ENST00000532126 553 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC015802.2-201ENST00000589690 189 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 PWAR1-201ENST00000624188 2414 ntBASIC6.35□□□□□ -1.39
CCSER1Q9C0I3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 OR13C1P-202ENST00000641378 2919 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 RN7SKP292-201ENST00000365522 317 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 RPS6P23-201ENST00000413224 722 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AL158827.1-201ENST00000416300 391 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AL354868.1-201ENST00000417077 482 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 MTND6P12-201ENST00000428247 522 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 LINC02210-201ENST00000444561 288 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 PSMA2P2-201ENST00000504319 686 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC111000.5-201ENST00000506559 1178 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 UGT2A3P7-201ENST00000510485 734 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC111000.6-201ENST00000514471 709 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC022826.1-201ENST00000519383 805 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC122688.1-201ENST00000541494 223 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 MIR3614-201ENST00000581261 86 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 294.4 ms