Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 TOMM20P1-201ENST00000534518 427 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC006512.2-201ENST00000543250 486 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL606834.3-201ENST00000602615 496 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC135178.6-201ENST00000605314 398 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL450270.1-201ENST00000606160 391 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC012213.4-201ENST00000606457 354 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL080312.2-201ENST00000613001 630 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC018926.1-201ENST00000616335 435 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC021755.4-201ENST00000616620 456 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 FAM27E2-201ENST00000619668 403 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 TNPO1P2-201ENST00000426249 2665 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 HSPD1P9-201ENST00000420325 1636 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 MAPK10-287ENST00000641217 3037 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SNORD116-4-201ENST00000384733 96 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 EEF1B2P8-201ENST00000414101 671 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC130360.1-201ENST00000425489 1117 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC097721.1-201ENST00000427150 1253 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO1P57-201ENST00000432182 261 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 MTND2P5-201ENST00000432656 1006 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 RPL6P30-201ENST00000443382 862 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL590004.3-202ENST00000445883 451 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 NPM1P49-201ENST00000448027 714 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 RANP2-201ENST00000456833 229 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO3P35-201ENST00000485582 781 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC011352.1-201ENST00000512300 793 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SUMO2P19-201ENST00000518920 295 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC087373.1-201ENST00000524920 491 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC130365.2-201ENST00000525882 1201 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 GTF2IP11-201ENST00000526931 420 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AP003717.3-201ENST00000544832 1180 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL132857.1-201ENST00000555180 708 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC021171.1-201ENST00000603137 706 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC124916.2-201ENST00000604416 224 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC108865.2-201ENST00000606881 432 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC004492.1-201ENST00000607036 742 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC006924.1-201ENST00000610750 559 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL355073.2-201ENST00000612106 557 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 CYCSP41-201ENST00000616920 296 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 TCL6_3.1-201ENST00000619064 137 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL445528.2-201ENST00000620582 470 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AP003476.1-201ENST00000623984 516 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC092608.3-201ENST00000625017 386 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC073488.6-201ENST00000632293 754 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AC083865.1-201ENST00000636634 831 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 MIR3974-201ENST00000637126 96 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 AL359976.1-201ENST00000418655 3528 ntBASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms