Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 OR7A8P-201ENST00000595427 913 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC022919.1-201ENST00000624979 626 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC004158.1-201ENST00000564508 4319 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 RPS2P45-201ENST00000469997 2057 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC42Q96M95 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC42Q96M95 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC42Q96M95 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC42Q96M95 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 RN7SKP86-201ENST00000410454 332 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 PPIAP27-201ENST00000453800 265 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 AZGP1P2-201ENST00000454506 345 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 DUTP7-201ENST00000507982 486 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 H3F3BP2-201ENST00000583907 357 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC091167.5-201ENST00000605689 894 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC111152.1-202ENST00000635848 339 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC002525.1-201ENST00000624392 1622 ntBASIC6.02□□□□□ -1.45
CCDC42Q96M95 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC42Q96M95 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC42Q96M95 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC006484.1-201ENST00000435086 1884 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 GAPDHP24-201ENST00000328713 983 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 RNA5SP500-201ENST00000364486 119 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 CST12P-201ENST00000457644 362 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC098818.1-201ENST00000478593 252 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 DEFB109A-201ENST00000482450 265 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 NPM1P28-201ENST00000492269 840 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 LDHAP1-201ENST00000509421 992 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC021193.1-201ENST00000511607 420 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AP003033.2-201ENST00000528901 805 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 OR1E3-201ENST00000575608 948 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 AP001437.1-201ENST00000608783 456 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.01□□□□□ -1.45
CCDC42Q96M95 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC42Q96M95 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCDC42Q96M95 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms