Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AL353662.1-201ENST00000439099 327 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 RPL6P30-201ENST00000443382 862 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC118758.1-202ENST00000454719 225 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC005165.2-201ENST00000466070 380 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC098847.1-201ENST00000473094 348 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC022336.1-201ENST00000475510 337 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 CR383656.1-201ENST00000484916 377 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AL117692.1-201ENST00000494283 713 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC122718.2-201ENST00000505325 591 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC091874.2-201ENST00000505889 720 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC008429.4-201ENST00000521201 182 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC113192.3-201ENST00000529152 742 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC018645.2-201ENST00000609151 472 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AL391834.2-201ENST00000609982 546 ntBASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CDK5RAP3Q96JB5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CDK5RAP3Q96JB5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 SNORD115-48-201ENST00000364764 76 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AL451142.1-201ENST00000375867 775 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 SNRPEP6-201ENST00000407465 277 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 MIR1275-201ENST00000408770 80 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 OR5W1P-201ENST00000423705 938 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 MTCO1P51-201ENST00000427672 1060 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 CUBNP2-201ENST00000443534 1139 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 SUMO2P1-206ENST00000445436 284 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC009963.3-201ENST00000458090 486 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 ACA64.4-201ENST00000459070 127 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC119751.4-201ENST00000507498 357 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC010468.3-201ENST00000508225 458 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 PRMT5P1-201ENST00000514351 598 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 MTATP6P9-201ENST00000515039 680 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 MTND1P6-201ENST00000523621 946 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC092868.3-201ENST00000560515 784 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC092332.1-201ENST00000563684 829 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 OR1E3-201ENST00000575608 948 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC119403.2-201ENST00000590960 598 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 ABI1P1-201ENST00000603375 1120 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 KATNBL1P5-201ENST00000605015 517 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AL049777.1-201ENST00000622740 518 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC010872.1-201ENST00000624225 675 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 RBMY1HP-201ENST00000382759 1389 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC009501.3-201ENST00000605001 1352 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 AC073365.1-203ENST00000641055 1992 ntBASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP3Q96JB5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 THAP12P9-201ENST00000503971 2360 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 SNORA63.3-201ENST00000362682 132 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 SNORA77.2-201ENST00000408571 112 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms