Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTCO1P15-201ENST00000529569 1526 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.67□□□□□ -1.5
VPS33AQ96AX1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS33AQ96AX1 OR51C1P-202ENST00000641159 1444 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC114774.1-201ENST00000507410 1770 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 RNA5SP211-201ENST00000365516 117 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 RNU6-152P-201ENST00000384037 107 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 RPL11P3-201ENST00000395256 523 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AMZ2P2-201ENST00000406819 1057 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL358178.1-201ENST00000407698 397 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 BX276092.6-201ENST00000430476 250 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 RPL12P18-201ENST00000437175 325 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL590004.3-202ENST00000445883 451 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 BX276092.8-201ENST00000455722 250 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC104164.1-201ENST00000460282 590 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 GLUD1P3-202ENST00000508551 200 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AP000859.1-201ENST00000525536 307 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 ZNF322P1-201ENST00000568013 1209 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL512413.1-201ENST00000606489 382 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AL139254.3-201ENST00000641097 674 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 TCP11X1-202ENST00000622971 1372 ntBASIC5.66□□□□□ -1.5
VPS33AQ96AX1 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
VPS33AQ96AX1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 RNA5SP110-201ENST00000362638 115 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 SNORA5.1-201ENST00000384275 131 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC104297.1-201ENST00000393779 870 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 HMGB3P7-201ENST00000400214 611 ntBASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.65□□□□□ -1.5
VPS33AQ96AX1 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms