Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 ZNF92P2-201ENST00000600543 1059 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL645933.2-201ENST00000606743 1207 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AL591167.1-201ENST00000607321 456 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC018754.1-201ENST00000607486 925 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC063944.3-201ENST00000609969 533 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AC005393.1-201ENST00000617916 584 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 MIR6837-201ENST00000620884 64 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 LINC02019-201ENST00000608605 2060 ntBASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMC1BQ8NDV3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 RNU6-1331P-201ENST00000363658 106 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 RNA5SP394-201ENST00000364216 119 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MIR421-201ENST00000365696 85 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MIR141-201ENST00000384975 95 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 RN7SKP213-201ENST00000410746 298 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 FAR2P2-201ENST00000413041 594 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 TRIM60P17-201ENST00000415181 719 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 FAR2P4-202ENST00000425399 584 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AL662874.1-201ENST00000426065 230 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC127526.2-201ENST00000426436 775 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CYP4F32P-201ENST00000426492 504 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 ZNF965P-201ENST00000432501 817 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 FAR2P1-206ENST00000449736 709 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC009220.1-201ENST00000451614 275 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 RN7SL172P-201ENST00000460535 303 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC034244.2-201ENST00000514668 858 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 SNORA76.2-201ENST00000517095 137 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC010547.7-201ENST00000570323 333 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MIR4697-201ENST00000582977 78 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC096947.1-201ENST00000603233 470 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MIR7159-201ENST00000620587 66 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MRPL57P1-201ENST00000621486 265 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 AC097460.3-201ENST00000623099 442 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 MAPK10-350ENST00000641777 965 ntBASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
SMC1BQ8NDV3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SMC1BQ8NDV3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.34□□□□□ -1.24
SMC1BQ8NDV3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.34□□□□□ -1.24
SMC1BQ8NDV3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 CASC19-248ENST00000641674 1356 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC131971.1-201ENST00000332881 1482 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AL353692.2-201ENST00000407054 335 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 RPS12P17-201ENST00000438591 377 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC006326.1-201ENST00000445465 787 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms