Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RNU6-236P-201ENST00000363886 106 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RNU1-24P-201ENST00000364285 165 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RNU6-636P-201ENST00000384598 107 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 GCNT1P4-201ENST00000404096 329 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AL035422.1-201ENST00000414193 397 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RPS3AP37-201ENST00000419176 745 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC083862.1-201ENST00000427378 1242 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RN7SL705P-201ENST00000481678 294 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC104687.1-201ENST00000485829 412 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC005351.1-201ENST00000511152 786 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC074087.1-201ENST00000512059 724 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC011352.2-201ENST00000514574 1016 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 SCARNA5-201ENST00000516201 276 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 FXNP1-201ENST00000555153 337 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AP001357.1-201ENST00000586304 1053 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC024060.1-201ENST00000607052 494 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC013468.1-201ENST00000608680 598 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AP001437.1-201ENST00000608783 456 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 MIR6862-1-201ENST00000613016 70 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 MIR6862-2-201ENST00000614755 70 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC231759.1-201ENST00000616455 597 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 Z99129.2-201ENST00000619967 314 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AC090897.3-201ENST00000636973 1157 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 MSL3P1-202ENST00000440028 1468 ntBASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.71□□□□□ -1.34
SYNPOQ8N3V7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC107021.2-201ENST00000567714 2095 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC073055.1-201ENST00000456901 1621 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 RPL11P4-201ENST00000332269 436 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 RNA5SP188-201ENST00000362916 129 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 RNU6-185P-201ENST00000384421 107 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 RPL23AP59-201ENST00000399415 461 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 RPS27AP11-201ENST00000402798 447 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC013404.1-201ENST00000413068 249 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 TAF13P2-201ENST00000416876 286 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 CRYGGP-201ENST00000443337 145 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 COX4I1P2-201ENST00000447446 547 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC026826.1-201ENST00000493002 361 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC125612.1-201ENST00000547580 377 ntBASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.7□□□□□ -1.34
SYNPOQ8N3V7 AC106785.4-201ENST00000569492 412 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms