Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL592429.1-201ENST00000403909 1473 ntBASIC5.82□□□□□ -1.48
CDKL3Q8IVW4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL3Q8IVW4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL3Q8IVW4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.82□□□□□ -1.48
CDKL3Q8IVW4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDKL3Q8IVW4 AL360270.2-201ENST00000562952 5985 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC020633.1-201ENST00000468439 2247 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 RNA5SP30-201ENST00000365552 115 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 U3.23-201ENST00000391132 200 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 RPS6P23-201ENST00000413224 722 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 BX323845.3-201ENST00000428215 527 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 NANOGP9-201ENST00000439890 892 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 CYCSP51-201ENST00000443545 318 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC022215.1-201ENST00000481770 362 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 SUMO2P4-201ENST00000504193 276 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC122688.1-201ENST00000541494 223 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 MIR4311-201ENST00000580794 100 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AL596275.2-207ENST00000641188 675 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 OR8G3P-202ENST00000641572 1255 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC123769.1-201ENST00000530992 3192 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL3Q8IVW4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 PWAR1-201ENST00000624188 2414 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC092681.1-201ENST00000297369 291 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 SNORA11.5-201ENST00000408163 128 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 NENFP1-201ENST00000419476 466 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AL022331.1-201ENST00000429025 477 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AL359839.1-201ENST00000451975 1160 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 RPSAP37-201ENST00000470913 821 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 DUTP7-201ENST00000507982 486 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC114781.3-201ENST00000512083 142 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 Vault.2-201ENST00000516519 98 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 OR4A17P-201ENST00000526032 904 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 NPM1P5-201ENST00000557228 838 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC009779.8-202ENST00000607990 932 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC007786.3-201ENST00000615154 596 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC073593.1-201ENST00000624500 411 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.8□□□□□ -1.48
CDKL3Q8IVW4 AC015689.2-201ENST00000528172 1738 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms