Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL391994.1-201ENST00000254724 282 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RNU4-12P-201ENST00000365233 139 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RNU6-259P-201ENST00000383999 107 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 FGF7P8-201ENST00000402994 292 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL096711.1-201ENST00000404780 554 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 SNORA11D-201ENST00000408548 128 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 SNORA11E-201ENST00000408778 128 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 TPMTP3-201ENST00000411928 735 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL773545.3-201ENST00000414297 706 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MEAF6P1-201ENST00000416092 327 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RPL12P43-201ENST00000420608 499 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RPS4XP16-201ENST00000427198 791 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL590103.1-201ENST00000434488 307 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MTCO3P18-201ENST00000440206 761 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MTND3P1-201ENST00000441336 220 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL158214.1-201ENST00000444423 404 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MTCYBP42-201ENST00000444653 1130 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL034399.1-201ENST00000451535 380 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL390728.3-201ENST00000452704 270 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RPL7P32-201ENST00000457119 744 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 CCDC75P1-201ENST00000469247 791 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AP000852.1-201ENST00000472460 573 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 TMED11P-201ENST00000479478 690 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RN7SL776P-201ENST00000493390 268 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC106872.4-201ENST00000510050 523 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 RNU6-314P-201ENST00000516574 104 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC021733.2-201ENST00000518830 497 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 SLC25A51P2-201ENST00000535708 889 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 OR11J2P-201ENST00000555298 907 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC090286.3-201ENST00000573133 187 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC005498.1-201ENST00000592125 465 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 PRR13P5-201ENST00000596581 442 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 YWHAQP7-201ENST00000603536 658 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 BNIP3P9-201ENST00000603714 553 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL392112.1-201ENST00000605115 829 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AL162730.1-201ENST00000605734 292 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 AC087565.3-203ENST00000641018 837 ntBASIC6.47□□□□□ -1.37
ATG4DQ86TL0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4DQ86TL0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms