Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 HIGD1AP5-201ENST00000529959 259 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 Z82209.2-201ENST00000623410 2012 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC068769.1-201ENST00000474767 2426 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC096921.1-201ENST00000411661 375 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC104634.1-201ENST00000452720 462 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 AL359195.2-201ENST00000623657 4412 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 HMGB1P32-201ENST00000425971 565 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 KRT8P51-201ENST00000438938 274 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 RN7SKP147-201ENST00000517154 244 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 AC092490.3-201ENST00000545370 572 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 AL513327.3-201ENST00000602618 469 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 MAPK10-263ENST00000641052 4307 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 OR4F13P-202ENST00000560066 2054 ntBASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CDC42BPAQ5VT25 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 INTS6P1-201ENST00000504674 2530 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 RNGTTP1-201ENST00000420965 728 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 OR10T1P-201ENST00000424327 947 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 AC092651.1-201ENST00000426110 312 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 RPS3AP53-201ENST00000454716 778 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 Z92846.1-201ENST00000456203 268 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 RN7SL423P-201ENST00000486202 304 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 FTH1P8-201ENST00000498161 514 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 AC005341.1-201ENST00000571086 708 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 H3F3BP2-201ENST00000583907 357 ntBASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.21□□□□□ -1.09
CDC42BPAQ5VT25 AC016745.2-201ENST00000608834 3443 ntBASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 AC006600.2-201ENST00000624834 2506 ntBASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 AC068870.1-201ENST00000563737 2455 ntBASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CDC42BPAQ5VT25 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 CYB5AP4-201ENST00000396692 399 ntBASIC8.2□□□□□ -1.1
CDC42BPAQ5VT25 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms