Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 CASC19-221ENST00000641309 1382 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 RN7SKP28-201ENST00000364770 305 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 BMS1P3-201ENST00000372011 932 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 ARSFP1-201ENST00000398758 477 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 VDAC2P1-201ENST00000399358 958 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 RNA5SP198-201ENST00000410376 127 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 KIF4CP-201ENST00000422742 1279 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC108479.1-201ENST00000431142 427 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AL359265.1-201ENST00000440296 795 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 BMS1P10-201ENST00000443754 1120 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 RN7SL346P-201ENST00000491561 294 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 RPS17P5-201ENST00000498293 408 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC106730.2-201ENST00000566641 540 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC024267.2-201ENST00000582737 417 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AL139124.1-201ENST00000609123 421 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC091059.2-201ENST00000623355 614 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC021766.1-201ENST00000624404 741 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC073488.3-201ENST00000631611 778 ntBASIC5.09□□□□□ -1.59
CCDC58Q4VC31 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC58Q4VC31 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CCDC58Q4VC31 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.09□□□□□ -1.6
CCDC58Q4VC31 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC58Q4VC31 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC58Q4VC31 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MTCO1P15-201ENST00000529569 1526 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 SELENOWP1-201ENST00000322792 252 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC016739.1-201ENST00000405359 345 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 RPL35AP3-201ENST00000414680 288 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MTND6P12-201ENST00000428247 522 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 DEFA9P-201ENST00000433042 285 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 OR7E116P-201ENST00000448529 957 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 RN7SL515P-201ENST00000463999 297 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 OR7E22P-201ENST00000478335 1035 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC099521.1-201ENST00000482557 334 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 IGLV3-24-201ENST00000517477 197 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 NPIPB14P-203ENST00000532298 987 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MIR3157-201ENST00000578688 85 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MIR7853-201ENST00000584820 132 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AL591222.2-201ENST00000604443 754 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC011891.2-201ENST00000604949 397 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC012511.1-201ENST00000608140 449 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC211486.4-201ENST00000621495 113 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 AC089999.3-201ENST00000622440 577 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 443.4 ms