Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 PWAR1-201ENST00000624188 2414 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AL590763.1-201ENST00000398297 1545 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 RN7SKP28-201ENST00000364770 305 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC019205.1-201ENST00000421830 730 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AL450996.1-201ENST00000445574 1202 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 OR7E116P-201ENST00000448529 957 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 SLC25A51P1-201ENST00000468432 871 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC090589.1-201ENST00000473109 362 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC004815.1-201ENST00000484185 331 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 RN7SL808P-201ENST00000496066 299 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC090638.1-201ENST00000498296 909 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC023818.1-201ENST00000498379 384 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 OR5M14P-201ENST00000506803 618 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC021146.10-201ENST00000515628 706 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 BX510359.5-201ENST00000515651 304 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 NRBF2P4-201ENST00000520874 850 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AL049779.3-201ENST00000557141 606 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC015720.2-201ENST00000567709 334 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AL683813.2-201ENST00000605245 502 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 PPATP2-201ENST00000605635 508 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AL118522.2-201ENST00000616045 615 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC132068.1-201ENST00000623805 459 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 AC079776.5-201ENST00000641920 211 ntBASIC6.65□□□□□ -1.34
SHROOM1Q2M3G4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.65□□□□□ -1.35
SHROOM1Q2M3G4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 U3.2-201ENST00000362981 210 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 TRAV35-201ENST00000390462 330 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 RPL7P58-201ENST00000402913 758 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AL606490.1-201ENST00000452266 765 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 SBDSP1-204ENST00000453858 737 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 PGAM1P13-201ENST00000507497 754 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 NPM1P21-201ENST00000513394 762 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 OR11J2P-201ENST00000555298 907 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC107993.1-201ENST00000591343 684 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AL445222.1-201ENST00000607259 628 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 AC211433.2-201ENST00000608433 387 ntBASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.64□□□□□ -1.35
SHROOM1Q2M3G4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms