Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC009362.1-201ENST00000427253 406 ntBASIC5.78□□□□□ -1.48
CBX1P83916 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.78□□□□□ -1.48
CBX1P83916 GAPDHP19-201ENST00000431768 1005 ntBASIC5.78□□□□□ -1.48
CBX1P83916 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.78□□□□□ -1.48
CBX1P83916 FTLP19-201ENST00000433300 394 ntBASIC5.78□□□□□ -1.48
CBX1P83916 RPL3P11-201ENST00000434028 1146 ntBASIC5.78□□□□□ -1.48
CBX1P83916 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 CBX5P1-201ENST00000468470 561 ntBASIC5.78□□□□□ -1.48
CBX1P83916 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.78□□□□□ -1.48
CBX1P83916 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.78□□□□□ -1.48
CBX1P83916 AC114940.1-201ENST00000512162 1265 ntBASIC5.78□□□□□ -1.48
CBX1P83916 RFPL4AP5-201ENST00000514977 504 ntBASIC5.78□□□□□ -1.48
CBX1P83916 AC093878.1-201ENST00000515630 432 ntBASIC5.78□□□□□ -1.48
CBX1P83916 IGKV1D-32-201ENST00000517449 318 ntBASIC5.78□□□□□ -1.48
CBX1P83916 CDC42P3-201ENST00000518493 633 ntBASIC5.78□□□□□ -1.48
CBX1P83916 OR56A7P-201ENST00000524865 941 ntBASIC5.78□□□□□ -1.48
CBX1P83916 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 AP001994.1-201ENST00000527539 826 ntBASIC5.78□□□□□ -1.48
CBX1P83916 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.78□□□□□ -1.48
CBX1P83916 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.78□□□□□ -1.48
CBX1P83916 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.78□□□□□ -1.48
CBX1P83916 AC133552.4-201ENST00000576103 676 ntBASIC5.78□□□□□ -1.48
CBX1P83916 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 AC103564.3-201ENST00000621194 220 ntBASIC5.78□□□□□ -1.48
CBX1P83916 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CBX1P83916 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 AC027559.1-201ENST00000636288 271 ntBASIC5.78□□□□□ -1.48
CBX1P83916 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CBX1P83916 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CBX1P83916 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CBX1P83916 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.77□□□□□ -1.49
CBX1P83916 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CBX1P83916 SALL4P2-201ENST00000423288 2910 ntBASIC5.77□□□□□ -1.49
CBX1P83916 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CBX1P83916 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 RN7SKP16-201ENST00000410180 299 ntBASIC5.77□□□□□ -1.49
CBX1P83916 PCNPP4-201ENST00000414817 517 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.77□□□□□ -1.49
CBX1P83916 OR52S1P-201ENST00000427016 937 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.77□□□□□ -1.49
CBX1P83916 AC015983.1-201ENST00000441577 373 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 RN7SL868P-201ENST00000485915 303 ntBASIC5.77□□□□□ -1.49
CBX1P83916 MTCO1P55-201ENST00000489829 745 ntBASIC5.77□□□□□ -1.49
CBX1P83916 DUTP1-201ENST00000493631 470 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 RN7SL447P-201ENST00000494711 245 ntBASIC5.77□□□□□ -1.49
CBX1P83916 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.77□□□□□ -1.49
CBX1P83916 GOLGA5P1-201ENST00000507317 980 ntBASIC5.77□□□□□ -1.49
CBX1P83916 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 SETP21-201ENST00000514799 892 ntBASIC5.77□□□□□ -1.49
CBX1P83916 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 AC103855.4-201ENST00000533158 265 ntBASIC5.77□□□□□ -1.49
CBX1P83916 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.77□□□□□ -1.49
CBX1P83916 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 RN7SL657P-201ENST00000582431 293 ntBASIC5.77□□□□□ -1.49
CBX1P83916 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.77□□□□□ -1.49
CBX1P83916 AC024451.4-201ENST00000602578 752 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AC087283.1-201ENST00000604029 1074 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AC114477.1-201ENST00000605097 605 ntBASIC5.77□□□□□ -1.49
CBX1P83916 Z93930.3-201ENST00000607919 749 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AC015914.2-201ENST00000618167 288 ntBASIC5.77□□□□□ -1.49
CBX1P83916 RAB28P4-201ENST00000622233 665 ntBASIC5.77□□□□□ -1.49
CBX1P83916 AP003072.5-201ENST00000623872 773 ntBASIC5.77□□□□□ -1.49
CBX1P83916 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CBX1P83916 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CBX1P83916 Z83820.1-201ENST00000456978 1499 ntBASIC5.77□□□□□ -1.49
CBX1P83916 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CBX1P83916 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CBX1P83916 AC007996.1-201ENST00000620414 2821 ntBASIC5.76□□□□□ -1.49
CBX1P83916 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CBX1P83916 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CBX1P83916 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms