Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL132875.1-201ENST00000403623 949 ntBASIC5.73□□□□□ -1.49
RAE1P78406 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 RPS3AP25-201ENST00000411660 793 ntBASIC5.73□□□□□ -1.49
RAE1P78406 MYL6P5-201ENST00000412707 459 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.73□□□□□ -1.49
RAE1P78406 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 AC023141.3-201ENST00000436698 278 ntBASIC5.73□□□□□ -1.49
RAE1P78406 RPL7P33-201ENST00000444159 742 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC010240.2-201ENST00000445363 1205 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC016027.4-201ENST00000450866 277 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.73□□□□□ -1.49
RAE1P78406 TRBV5-2-201ENST00000489095 273 ntBASIC5.73□□□□□ -1.49
RAE1P78406 PRELID3BP6-201ENST00000503839 571 ntBASIC5.73□□□□□ -1.49
RAE1P78406 RNA5SP441-201ENST00000516809 88 ntBASIC5.73□□□□□ -1.49
RAE1P78406 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.73□□□□□ -1.49
RAE1P78406 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 CIR1P1-201ENST00000524055 1133 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.73□□□□□ -1.49
RAE1P78406 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.73□□□□□ -1.49
RAE1P78406 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.73□□□□□ -1.49
RAE1P78406 EIF1P5-201ENST00000585002 234 ntBASIC5.73□□□□□ -1.49
RAE1P78406 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.73□□□□□ -1.49
RAE1P78406 AC026741.1-201ENST00000605892 482 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 AL645933.2-201ENST00000606743 1207 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AL121652.1-201ENST00000608851 448 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AP005229.2-201ENST00000609980 697 ntBASIC5.73□□□□□ -1.49
RAE1P78406 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.73□□□□□ -1.49
RAE1P78406 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AL355974.3-201ENST00000617383 467 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AL512652.1-201ENST00000619006 500 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AL133370.2-201ENST00000619934 439 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC093875.1-201ENST00000623688 504 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC068787.1-201ENST00000623908 691 ntBASIC5.73□□□□□ -1.49
RAE1P78406 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 AL731532.1-201ENST00000623972 4236 ntBASIC5.73□□□□□ -1.49
RAE1P78406 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 AL356317.1-201ENST00000396110 1436 ntBASIC5.73□□□□□ -1.49
RAE1P78406 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RAE1P78406 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
RAE1P78406 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAE1P78406 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RAE1P78406 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 UGT2B24P-201ENST00000514441 1597 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC130304.1-201ENST00000622942 2385 ntBASIC5.72□□□□□ -1.49
RAE1P78406 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 AC120036.2-201ENST00000509729 1474 ntBASIC5.72□□□□□ -1.49
RAE1P78406 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAE1P78406 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.72□□□□□ -1.49
RAE1P78406 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 AL356968.2-201ENST00000412769 1257 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC130360.1-201ENST00000425489 1117 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC245884.2-201ENST00000426257 404 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 RPSAP65-201ENST00000429660 595 ntBASIC5.72□□□□□ -1.49
RAE1P78406 CLNS1AP1-201ENST00000435954 682 ntBASIC5.72□□□□□ -1.49
RAE1P78406 RRM2P4-201ENST00000441721 562 ntBASIC5.72□□□□□ -1.49
RAE1P78406 FTLP8-201ENST00000446770 267 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.72□□□□□ -1.49
RAE1P78406 snoU109.3-201ENST00000459477 145 ntBASIC5.72□□□□□ -1.49
RAE1P78406 RPSAP37-201ENST00000470913 821 ntBASIC5.72□□□□□ -1.49
RAE1P78406 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 AC098818.1-201ENST00000478593 252 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC005017.1-201ENST00000482002 490 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC008410.1-201ENST00000483777 339 ntBASIC5.72□□□□□ -1.49
RAE1P78406 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
RAE1P78406 PPM1AP1-201ENST00000502740 1135 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 AC096571.1-202ENST00000506634 735 ntBASIC5.72□□□□□ -1.49
RAE1P78406 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.72□□□□□ -1.49
RAE1P78406 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms