Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 ANKRD36P1-201ENST00000344424 659 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 RNU4-51P-201ENST00000364206 140 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 RN7SKP118-201ENST00000364331 330 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 RN7SKP257-201ENST00000364525 309 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLRN1P58418 FDPSP5-201ENST00000399474 1057 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 ZNF37CP-201ENST00000406795 241 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLRN1P58418 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 RPP40P1-201ENST00000426762 456 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 E2F6P1-201ENST00000428850 745 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 GSTA7P-201ENST00000438425 448 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 E2F6P3-201ENST00000441743 743 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 HMGB3P6-201ENST00000444896 598 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC068135.1-201ENST00000446164 246 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 OTX2P1-201ENST00000450956 354 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 AC244505.3-201ENST00000454598 187 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC126121.1-201ENST00000482313 553 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC068522.1-201ENST00000482895 345 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 RPL19P11-201ENST00000495944 589 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC025459.1-201ENST00000504072 156 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC093325.1-201ENST00000508378 326 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 RN7SKP248-201ENST00000516278 305 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.82□□□□□ -1.48
CLRN1P58418 CHEK2P2-201ENST00000554701 672 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC090826.1-203ENST00000569235 490 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLRN1P58418 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC068020.1-201ENST00000594215 661 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AC130352.1-201ENST00000602979 661 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AL591222.2-201ENST00000604443 754 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 SNORD96A-201ENST00000606577 79 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC022106.1-201ENST00000612834 766 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 AC007671.1-201ENST00000616957 830 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 AL596275.2-207ENST00000641188 675 ntBASIC5.82□□□□□ -1.48
CLRN1P58418 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLRN1P58418 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.82□□□□□ -1.48
CLRN1P58418 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLRN1P58418 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.82□□□□□ -1.48
CLRN1P58418 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms