Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 AL033543.1-201ENST00000623440 13454 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC093297.3-201ENST00000607056 2517 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 AC110373.1-201ENST00000505994 3505 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 AL591848.4-201ENST00000567832 3472 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 AL136984.1-201ENST00000607611 1893 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 SNORD35A-201ENST00000363389 86 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RNA5SP27-201ENST00000363839 119 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 RPL23AP59-201ENST00000399415 461 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RPL7P27-201ENST00000403775 720 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AL133260.1-201ENST00000405720 405 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC105402.1-201ENST00000413336 545 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AL592310.1-201ENST00000414330 671 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 UBE2V1P14-201ENST00000415815 558 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 DPY19L1P2-201ENST00000426647 915 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RPS4XP16-201ENST00000427198 791 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 MTCO1P52-201ENST00000433928 531 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 MTND1P26-201ENST00000440488 538 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 SEPT14P24-201ENST00000447236 180 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 RPL7P45-201ENST00000455851 743 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RBMY2HP-201ENST00000457961 720 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RPL6P9-201ENST00000466502 859 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC107015.1-201ENST00000466902 747 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC093719.1-201ENST00000480427 441 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RN7SL714P-201ENST00000487050 298 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC010343.2-201ENST00000510162 224 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RNA5SP418-201ENST00000515951 117 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 RNU6-1028P-201ENST00000517164 93 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 EEF1A1P37-201ENST00000522748 715 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 MORF4L1P3-201ENST00000525966 950 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 OR5AK3P-201ENST00000527486 1297 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC135983.3-201ENST00000528049 1226 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 MIR4433B-201ENST00000581329 102 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC024589.2-201ENST00000605642 1294 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC009974.1-201ENST00000608881 455 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 FRG1HP-204ENST00000617940 757 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AL121890.3-201ENST00000618494 516 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 MIR7159-201ENST00000620587 66 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC104985.3-201ENST00000623479 597 ntBASIC5.81□□□□□ -1.48
SUMO3P55854 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.81□□□□□ -1.48
SUMO3P55854 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SUMO3P55854 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.81□□□□□ -1.48
SUMO3P55854 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SUMO3P55854 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SUMO3P55854 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.8□□□□□ -1.48
SUMO3P55854 AC011369.2-201ENST00000624423 1567 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 MAPK10-287ENST00000641217 3037 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SUMO3P55854 AC104162.1-201ENST00000430831 2382 ntBASIC5.8□□□□□ -1.48
SUMO3P55854 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms