Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDH6P55285 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
CDH6P55285 PWAR1-201ENST00000624188 2414 ntBASIC5.88□□□□□ -1.47
CDH6P55285 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 AC068870.1-201ENST00000563737 2455 ntBASIC5.88□□□□□ -1.47
CDH6P55285 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 AC007842.1-201ENST00000597336 2039 ntBASIC5.88□□□□□ -1.47
CDH6P55285 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
CDH6P55285 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH6P55285 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH6P55285 AC245060.4-201ENST00000413293 1121 ntBASIC5.88□□□□□ -1.47
CDH6P55285 CDY8P-201ENST00000428380 1279 ntBASIC5.88□□□□□ -1.47
CDH6P55285 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH6P55285 HMGB3P24-201ENST00000433260 622 ntBASIC5.88□□□□□ -1.47
CDH6P55285 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH6P55285 CDY20P-201ENST00000447528 1279 ntBASIC5.88□□□□□ -1.47
CDH6P55285 AP006222.1-205ENST00000450734 457 ntBASIC5.88□□□□□ -1.47
CDH6P55285 AC011476.1-201ENST00000466725 307 ntBASIC5.88□□□□□ -1.47
CDH6P55285 NDUFA5P5-201ENST00000468361 342 ntBASIC5.88□□□□□ -1.47
CDH6P55285 AC094085.1-201ENST00000468914 584 ntBASIC5.88□□□□□ -1.47
CDH6P55285 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH6P55285 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH6P55285 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH6P55285 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH6P55285 SNORA70.20-201ENST00000516848 126 ntBASIC5.88□□□□□ -1.47
CDH6P55285 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.88□□□□□ -1.47
CDH6P55285 NANOGNBP2-201ENST00000544753 553 ntBASIC5.88□□□□□ -1.47
CDH6P55285 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH6P55285 HSPE1P2-201ENST00000554777 306 ntBASIC5.88□□□□□ -1.47
CDH6P55285 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH6P55285 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH6P55285 AC015802.2-201ENST00000589690 189 ntBASIC5.88□□□□□ -1.47
CDH6P55285 AC063977.5-201ENST00000601044 974 ntBASIC5.88□□□□□ -1.47
CDH6P55285 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH6P55285 MIR1910-201ENST00000636955 80 ntBASIC5.88□□□□□ -1.47
CDH6P55285 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH6P55285 AC012078.1-201ENST00000405035 1646 ntBASIC5.88□□□□□ -1.47
CDH6P55285 HSPD1P7-201ENST00000447985 1686 ntBASIC5.88□□□□□ -1.47
CDH6P55285 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CDH6P55285 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH6P55285 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH6P55285 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
CDH6P55285 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH6P55285 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CDH6P55285 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 RNA5SP30-201ENST00000365552 115 ntBASIC5.87□□□□□ -1.47
CDH6P55285 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH6P55285 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH6P55285 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH6P55285 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 RNF10P1-201ENST00000418589 369 ntBASIC5.87□□□□□ -1.47
CDH6P55285 NENFP1-201ENST00000419476 466 ntBASIC5.87□□□□□ -1.47
CDH6P55285 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.87□□□□□ -1.47
CDH6P55285 AL022331.1-201ENST00000429025 477 ntBASIC5.87□□□□□ -1.47
CDH6P55285 AC099670.2-201ENST00000435130 321 ntBASIC5.87□□□□□ -1.47
CDH6P55285 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH6P55285 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.87□□□□□ -1.47
CDH6P55285 RPS17P5-201ENST00000498293 408 ntBASIC5.87□□□□□ -1.47
CDH6P55285 IGLV3-24-201ENST00000517477 197 ntBASIC5.87□□□□□ -1.47
CDH6P55285 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH6P55285 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH6P55285 AC009237.12-201ENST00000604755 742 ntBASIC5.87□□□□□ -1.47
CDH6P55285 AL365181.4-201ENST00000609800 547 ntBASIC5.87□□□□□ -1.47
CDH6P55285 AC005618.4-201ENST00000625053 554 ntBASIC5.87□□□□□ -1.47
CDH6P55285 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.87□□□□□ -1.47
CDH6P55285 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CDH6P55285 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH6P55285 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH6P55285 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CDH6P55285 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.87□□□□□ -1.47
CDH6P55285 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.87□□□□□ -1.47
CDH6P55285 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CDH6P55285 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CDH6P55285 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CDH6P55285 AC123769.1-201ENST00000530992 3192 ntBASIC5.86□□□□□ -1.47
CDH6P55285 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDH6P55285 OR4F13P-202ENST00000560066 2054 ntBASIC5.86□□□□□ -1.47
CDH6P55285 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 275.2 ms