Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 AC104629.1-201ENST00000494226 508 ntBASIC6.4□□□□□ -1.38
COPB1P53618 AC093815.1-201ENST00000508637 280 ntBASIC6.4□□□□□ -1.38
COPB1P53618 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.4□□□□□ -1.38
COPB1P53618 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.4□□□□□ -1.38
COPB1P53618 TOMM20P1-201ENST00000534518 427 ntBASIC6.4□□□□□ -1.38
COPB1P53618 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.4□□□□□ -1.38
COPB1P53618 AC011270.1-201ENST00000558606 583 ntBASIC6.4□□□□□ -1.38
COPB1P53618 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 AC093524.1-201ENST00000564266 1094 ntBASIC6.4□□□□□ -1.38
COPB1P53618 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.4□□□□□ -1.38
COPB1P53618 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.4□□□□□ -1.38
COPB1P53618 BNIP3P27-201ENST00000599991 412 ntBASIC6.4□□□□□ -1.38
COPB1P53618 AC068768.2-201ENST00000602352 343 ntBASIC6.4□□□□□ -1.38
COPB1P53618 HIRAP1-201ENST00000605318 787 ntBASIC6.4□□□□□ -1.38
COPB1P53618 AC242628.1-201ENST00000606810 391 ntBASIC6.4□□□□□ -1.38
COPB1P53618 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.4□□□□□ -1.38
COPB1P53618 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.4□□□□□ -1.38
COPB1P53618 AC092451.3-201ENST00000625067 1343 ntBASIC6.4□□□□□ -1.39
COPB1P53618 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPB1P53618 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COPB1P53618 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.4□□□□□ -1.39
COPB1P53618 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
COPB1P53618 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COPB1P53618 MFSD8-219ENST00000641228 2559 ntBASIC6.4□□□□□ -1.39
COPB1P53618 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COPB1P53618 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.4□□□□□ -1.39
COPB1P53618 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
COPB1P53618 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.4□□□□□ -1.39
COPB1P53618 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.4□□□□□ -1.39
COPB1P53618 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
COPB1P53618 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COPB1P53618 AP004607.3-201ENST00000530354 3915 ntBASIC6.39□□□□□ -1.39
COPB1P53618 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COPB1P53618 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 AL096711.1-201ENST00000404780 554 ntBASIC6.39□□□□□ -1.39
COPB1P53618 UBE2V1P15-201ENST00000407776 448 ntBASIC6.39□□□□□ -1.39
COPB1P53618 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 UBE2V1P6-201ENST00000430840 422 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 NPM1P48-201ENST00000436002 853 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 AL353662.1-201ENST00000439099 327 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AL158053.1-201ENST00000441503 453 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC015983.1-201ENST00000441577 373 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.39□□□□□ -1.39
COPB1P53618 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 AC016724.1-201ENST00000453215 421 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 AC111000.6-201ENST00000514471 709 ntBASIC6.39□□□□□ -1.39
COPB1P53618 RNA5SP441-201ENST00000516809 88 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.39□□□□□ -1.39
COPB1P53618 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 OR10D4P-201ENST00000525892 951 ntBASIC6.39□□□□□ -1.39
COPB1P53618 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 MTND5P21-201ENST00000531961 522 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.39□□□□□ -1.39
COPB1P53618 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.39□□□□□ -1.39
COPB1P53618 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.39□□□□□ -1.39
COPB1P53618 LINC00557-201ENST00000563184 1279 ntBASIC6.39□□□□□ -1.39
COPB1P53618 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.39□□□□□ -1.39
COPB1P53618 AL078601.3-201ENST00000573303 535 ntBASIC6.39□□□□□ -1.39
COPB1P53618 DNAJC19P3-201ENST00000594491 331 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 AC145423.1-201ENST00000605712 336 ntBASIC6.39□□□□□ -1.39
COPB1P53618 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.39□□□□□ -1.39
COPB1P53618 AC017076.1-201ENST00000607613 578 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC092681.3-201ENST00000609463 678 ntBASIC6.39□□□□□ -1.39
COPB1P53618 AC008147.4-201ENST00000617570 1204 ntBASIC6.39□□□□□ -1.39
COPB1P53618 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 OR11H2-202ENST00000641517 1085 ntBASIC6.39□□□□□ -1.39
COPB1P53618 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
COPB1P53618 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.39□□□□□ -1.39
COPB1P53618 AC130360.2-201ENST00000533477 1556 ntBASIC6.39□□□□□ -1.39
COPB1P53618 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COPB1P53618 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPB1P53618 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COPB1P53618 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms