Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CR1P49238 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CX3CR1P49238 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CR1P49238 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CR1P49238 AC093909.5-201ENST00000621839 1799 ntBASIC5.04□□□□□ -1.6
CX3CR1P49238 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
CX3CR1P49238 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CR1P49238 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CR1P49238 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 PEX12P1-201ENST00000400284 1048 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 AL589994.1-201ENST00000404962 340 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 RN7SKP29-201ENST00000410957 272 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC126120.1-201ENST00000431082 470 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CR1P49238 MED28P3-201ENST00000444288 531 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 AL122020.1-201ENST00000472287 459 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CR1P49238 RBBP4P1-201ENST00000502424 1276 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC021146.10-201ENST00000515628 706 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 SNORA70.11-201ENST00000515987 138 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 SNORA70.13-201ENST00000516116 138 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CR1P49238 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CR1P49238 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CR1P49238 MTND2P17-201ENST00000550281 688 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC010503.3-201ENST00000594355 540 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 LSM1P2-201ENST00000604911 322 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 MIR6793-201ENST00000612376 63 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CR1P49238 AL360270.2-201ENST00000562952 5985 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CR1P49238 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CR1P49238 PDZK1P1-202ENST00000425209 1350 ntBASIC5.03□□□□□ -1.6
CX3CR1P49238 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 CR383656.5-201ENST00000547616 1340 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CR1P49238 RN7SKP185-201ENST00000362813 326 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 RNU1-136P-201ENST00000384181 164 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AL356968.2-201ENST00000412769 1257 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC010740.1-201ENST00000417035 684 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC117434.1-201ENST00000419971 836 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 BX284632.2-201ENST00000421091 399 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 REREP1Y-201ENST00000422655 198 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 REREP2Y-201ENST00000439103 200 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 RPL5P25-201ENST00000441148 775 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AL512605.1-202ENST00000441919 381 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AL359955.2-201ENST00000445380 353 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC118758.1-202ENST00000454719 225 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 CST12P-201ENST00000457644 362 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 RPS23P2-201ENST00000463671 415 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 RPS7P6-201ENST00000485777 579 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC012123.2-201ENST00000485809 248 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 RN7SL193P-201ENST00000491708 276 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 DUTP1-201ENST00000493631 470 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC122718.2-201ENST00000505325 591 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC026782.2-201ENST00000510845 636 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 RNU6-943P-201ENST00000516960 98 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CR1P49238 PCNAP4-201ENST00000532690 730 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC006530.1-201ENST00000555980 571 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CR1P49238 CYCSP38-201ENST00000559840 322 ntBASIC5.02□□□□□ -1.61
CX3CR1P49238 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.02□□□□□ -1.61
CX3CR1P49238 AC087468.1-201ENST00000604365 630 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms