Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.15□□□□□ -1.26
RFC4P35249 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RFC4P35249 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.15□□□□□ -1.26
RFC4P35249 AC009163.6-201ENST00000612367 342 ntBASIC7.15□□□□□ -1.26
RFC4P35249 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
RFC4P35249 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.15□□□□□ -1.27
RFC4P35249 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.15□□□□□ -1.27
RFC4P35249 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RFC4P35249 AL121768.1-201ENST00000613917 2544 ntBASIC7.15□□□□□ -1.27
RFC4P35249 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 RN7SKP6-201ENST00000364795 319 ntBASIC7.14□□□□□ -1.27
RFC4P35249 RNU1-106P-201ENST00000384382 164 ntBASIC7.14□□□□□ -1.27
RFC4P35249 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.14□□□□□ -1.27
RFC4P35249 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.14□□□□□ -1.27
RFC4P35249 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.14□□□□□ -1.27
RFC4P35249 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.14□□□□□ -1.27
RFC4P35249 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 OR6D1P-201ENST00000436165 939 ntBASIC7.14□□□□□ -1.27
RFC4P35249 LDHAP2-201ENST00000437325 985 ntBASIC7.14□□□□□ -1.27
RFC4P35249 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.14□□□□□ -1.27
RFC4P35249 Z80107.2-201ENST00000445127 392 ntBASIC7.14□□□□□ -1.27
RFC4P35249 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 AL035090.1-201ENST00000454835 332 ntBASIC7.14□□□□□ -1.27
RFC4P35249 AC004129.2-201ENST00000457229 287 ntBASIC7.14□□□□□ -1.27
RFC4P35249 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.14□□□□□ -1.27
RFC4P35249 RPS23P2-201ENST00000463671 415 ntBASIC7.14□□□□□ -1.27
RFC4P35249 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.14□□□□□ -1.27
RFC4P35249 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 AC090142.2-201ENST00000483263 416 ntBASIC7.14□□□□□ -1.27
RFC4P35249 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.14□□□□□ -1.27
RFC4P35249 OR8G3P-201ENST00000533406 921 ntBASIC7.14□□□□□ -1.27
RFC4P35249 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.14□□□□□ -1.27
RFC4P35249 BLZF2P-201ENST00000553776 1130 ntBASIC7.14□□□□□ -1.27
RFC4P35249 OR11J2P-201ENST00000555298 907 ntBASIC7.14□□□□□ -1.27
RFC4P35249 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.14□□□□□ -1.27
RFC4P35249 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.14□□□□□ -1.27
RFC4P35249 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.14□□□□□ -1.27
RFC4P35249 CYCSP1-201ENST00000604815 315 ntBASIC7.14□□□□□ -1.27
RFC4P35249 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.14□□□□□ -1.27
RFC4P35249 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFC4P35249 AC112255.1-201ENST00000624070 2493 ntBASIC7.13□□□□□ -1.27
RFC4P35249 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RFC4P35249 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
RFC4P35249 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
RFC4P35249 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 AC107980.1-201ENST00000558671 3355 ntBASIC7.13□□□□□ -1.27
RFC4P35249 AC016251.2-201ENST00000623393 3089 ntBASIC7.13□□□□□ -1.27
RFC4P35249 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 U3.2-201ENST00000362981 210 ntBASIC7.13□□□□□ -1.27
RFC4P35249 SNORA56-201ENST00000383966 129 ntBASIC7.13□□□□□ -1.27
RFC4P35249 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.13□□□□□ -1.27
RFC4P35249 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.13□□□□□ -1.27
RFC4P35249 FAM96AP1-201ENST00000430879 482 ntBASIC7.13□□□□□ -1.27
RFC4P35249 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.13□□□□□ -1.27
RFC4P35249 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.13□□□□□ -1.27
RFC4P35249 AC105384.2-201ENST00000508433 640 ntBASIC7.13□□□□□ -1.27
RFC4P35249 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.13□□□□□ -1.27
RFC4P35249 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.13□□□□□ -1.27
RFC4P35249 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.13□□□□□ -1.27
RFC4P35249 AC007346.2-201ENST00000564816 892 ntBASIC7.13□□□□□ -1.27
RFC4P35249 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.13□□□□□ -1.27
RFC4P35249 AC067852.5-201ENST00000589299 310 ntBASIC7.13□□□□□ -1.27
RFC4P35249 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.13□□□□□ -1.27
RFC4P35249 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.13□□□□□ -1.27
RFC4P35249 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RFC4P35249 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFC4P35249 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 AC011493.1-201ENST00000596753 1632 ntBASIC7.12□□□□□ -1.27
RFC4P35249 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.12□□□□□ -1.27
RFC4P35249 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.12□□□□□ -1.27
RFC4P35249 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.12□□□□□ -1.27
RFC4P35249 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RFC4P35249 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 AL137141.1-201ENST00000624622 4836 ntBASIC7.12□□□□□ -1.27
RFC4P35249 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
RFC4P35249 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFC4P35249 MIR551A-201ENST00000385042 96 ntBASIC7.12□□□□□ -1.27
RFC4P35249 AC108075.1-201ENST00000424692 529 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms