Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.69□□□□□ -1.5
LINGO3P0C6S8 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AL359091.1-201ENST00000449048 1734 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 ADAM5-202ENST00000399789 1942 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AL133243.2-201ENST00000610331 1621 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 RNU1-49P-201ENST00000363468 159 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 RNU6-618P-201ENST00000363518 112 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 RNU6-670P-201ENST00000364312 104 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 SNORA43.1-201ENST00000364863 140 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 HSPE1P16-201ENST00000426640 348 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 RPL12P24-201ENST00000474907 486 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC069304.1-201ENST00000491593 704 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 ZNF519P4-201ENST00000514008 125 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC036111.2-201ENST00000533247 901 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AP001858.2-201ENST00000536213 601 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC012467.1-201ENST00000607740 256 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AL118508.4-201ENST00000624142 1176 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 FRG1EP-201ENST00000634469 770 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 AL137141.1-201ENST00000624622 4836 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 HSPD1P7-201ENST00000447985 1686 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 MTCO1P7-201ENST00000419523 1542 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 NAMPTP1-201ENST00000440465 2514 ntBASIC5.68□□□□□ -1.5
LINGO3P0C6S8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINGO3P0C6S8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC092111.2-201ENST00000611627 1414 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AC025574.1-201ENST00000554784 1653 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 OR5T3-201ENST00000303059 1023 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
LINGO3P0C6S8 AL136116.2-201ENST00000404020 785 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 RN7SKP144-201ENST00000411108 279 ntBASIC5.67□□□□□ -1.5
LINGO3P0C6S8 CTSL3P-202ENST00000412179 788 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms