Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AC023389.2-201ENST00000580031 955 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AP001267.4-201ENST00000602598 545 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 RN7SL787P-201ENST00000613000 284 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AL118508.4-201ENST00000624142 1176 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AL139254.3-201ENST00000641097 674 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 MIR193BHG-214ENST00000641765 509 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AOX3P-204ENST00000491025 2107 ntBASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RAB40ALP0C0E4 NAMPTP1-201ENST00000440465 2514 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC012078.1-201ENST00000405035 1646 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 CIR1P2-201ENST00000514821 1342 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL121776.1-201ENST00000429337 372 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 MRPS21P3-201ENST00000436696 262 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 RPS7P3-201ENST00000443360 580 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC002075.1-201ENST00000457396 676 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL022319.1-201ENST00000458183 1167 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 RPSAP39-201ENST00000467439 883 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC099521.1-201ENST00000482557 334 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 NENFP3-201ENST00000503735 313 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 HMGN2P36-201ENST00000529541 409 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC027544.3-201ENST00000535082 757 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 QTRT1P1-201ENST00000604344 1078 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 RPL12P48-201ENST00000605620 304 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL139099.4-201ENST00000614802 114 ntBASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RAB40ALP0C0E4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
RAB40ALP0C0E4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.59□□□□□ -1.52
RAB40ALP0C0E4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
RAB40ALP0C0E4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RAB40ALP0C0E4 AC130360.2-201ENST00000533477 1556 ntBASIC5.59□□□□□ -1.52
RAB40ALP0C0E4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.59□□□□□ -1.52
RAB40ALP0C0E4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 OR5T3-201ENST00000303059 1023 ntBASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RAB40ALP0C0E4 RNA5SP500-201ENST00000364486 119 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms