Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU1-150P-201ENST00000362491 162 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 RNU6-609P-201ENST00000365459 107 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 RNA5SP211-201ENST00000365516 117 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZIC3O60481 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZIC3O60481 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ZIC3O60481 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC016739.1-201ENST00000405359 345 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 RPS4XP5-201ENST00000419038 768 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AL035660.1-201ENST00000422041 222 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.37□□□□□ -1.55
ZIC3O60481 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.37□□□□□ -1.55
ZIC3O60481 BX323845.3-201ENST00000428215 527 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 PCBP2P1-201ENST00000437262 977 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 RPS12P17-201ENST00000438591 377 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC007000.2-201ENST00000442564 487 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.37□□□□□ -1.55
ZIC3O60481 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZIC3O60481 MTND6P32-201ENST00000457611 483 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 EIF2S2P5-201ENST00000457635 968 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 ACA64.1-201ENST00000459171 127 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 CABYRP1-201ENST00000465493 1045 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC018635.1-201ENST00000468292 1030 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZIC3O60481 AL355032.1-201ENST00000472981 438 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC108729.2-201ENST00000476543 840 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 FABP5P6-201ENST00000510588 409 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 HMGB1P47-201ENST00000511281 589 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC114781.3-201ENST00000512083 142 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC010374.2-201ENST00000512933 535 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC008147.3-201ENST00000548666 354 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.37□□□□□ -1.55
ZIC3O60481 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.37□□□□□ -1.55
ZIC3O60481 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.37□□□□□ -1.55
ZIC3O60481 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.37□□□□□ -1.55
ZIC3O60481 ZNF92P2-201ENST00000600543 1059 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC015982.1-201ENST00000608113 465 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC018645.2-201ENST00000609151 472 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.37□□□□□ -1.55
ZIC3O60481 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
ZIC3O60481 AL049777.1-201ENST00000622740 518 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AC097460.3-201ENST00000623099 442 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 MTND4P9-201ENST00000507819 1346 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.37□□□□□ -1.55
ZIC3O60481 Z83820.1-201ENST00000456978 1499 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.37□□□□□ -1.55
ZIC3O60481 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ZIC3O60481 HSPD1P8-201ENST00000400121 1658 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 AL355377.1-201ENST00000621125 1653 ntBASIC5.37□□□□□ -1.55
ZIC3O60481 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZIC3O60481 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZIC3O60481 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.36□□□□□ -1.55
ZIC3O60481 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.36□□□□□ -1.55
ZIC3O60481 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ZIC3O60481 SNORA63.3-201ENST00000362682 132 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.36□□□□□ -1.55
ZIC3O60481 GCNT6-201ENST00000379591 934 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 AL121835.1-201ENST00000404250 354 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 RNA5SP251-201ENST00000410614 137 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.36□□□□□ -1.55
ZIC3O60481 MORF4L1P7-201ENST00000426038 703 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 RNF2P1-201ENST00000442955 1010 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.36□□□□□ -1.55
ZIC3O60481 AL445687.2-201ENST00000458156 728 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 STRADBP1-201ENST00000478954 1281 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 AC093663.2-201ENST00000484625 313 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 RPL23AP73-201ENST00000492507 471 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.36□□□□□ -1.55
ZIC3O60481 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.36□□□□□ -1.55
ZIC3O60481 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.36□□□□□ -1.55
ZIC3O60481 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms