Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR130B-202ENST00000385018 82 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 RPL23AP17-201ENST00000401064 499 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 RPS3P2-201ENST00000421346 701 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC021876.1-201ENST00000425959 359 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 UBE2V1P6-201ENST00000430840 422 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 HSFY7P-201ENST00000432672 318 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 HSFY8P-201ENST00000437934 318 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 HSFY5P-201ENST00000453726 309 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 HLA-DPA3-207ENST00000454398 229 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 AL022319.1-201ENST00000458183 1167 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC023194.2-201ENST00000465398 406 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 AC025458.1-201ENST00000506046 166 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC010468.3-201ENST00000508225 458 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 OR4D12P-201ENST00000509361 911 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC011411.1-201ENST00000509592 876 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 IGHV4-55-201ENST00000520889 368 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 MTND1P6-201ENST00000523621 946 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 AC092332.1-201ENST00000563684 829 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC079148.1-201ENST00000565944 819 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC233266.2-201ENST00000567067 528 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 AC016180.1-201ENST00000567945 403 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.21□□□□□ -1.42
TRIM38O00635 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM38O00635 AC004775.1-201ENST00000607389 753 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC092681.3-201ENST00000609463 678 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AL645927.2-201ENST00000618350 349 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 FAM27E2-201ENST00000619668 403 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 AC125238.2-201ENST00000430003 1440 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 AC011455.2-201ENST00000599320 3336 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 AL359976.1-201ENST00000418655 3528 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM38O00635 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC005725.1-201ENST00000577346 2607 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 AL672167.2-201ENST00000377164 879 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 RNA5SP105-201ENST00000391123 113 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM38O00635 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM38O00635 AL121977.1-201ENST00000401636 979 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 SFR1P2-201ENST00000421841 730 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM38O00635 AL121882.1-201ENST00000422893 417 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC104843.2-201ENST00000427666 297 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 ATP5LP2-201ENST00000440646 311 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 OR13K1P-201ENST00000444577 975 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AC073109.1-201ENST00000445066 978 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 AC009963.4-201ENST00000448535 339 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 PPIAP7-201ENST00000454070 489 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM38O00635 AL355032.1-201ENST00000472981 438 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM38O00635 AC098583.1-201ENST00000480875 255 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 OR11I1P-201ENST00000486033 954 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 PPP1R11P1-201ENST00000486095 376 ntBASIC6.2□□□□□ -1.42
TRIM38O00635 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms