Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 HNRNPCP1-201ENST00000556181 766 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL671309.1-201ENST00000603750 544 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC026979.4-201ENST00000606555 645 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC018645.2-201ENST00000609151 472 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC010872.1-201ENST00000624225 675 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC006453.5-201ENST00000636451 619 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC011416.1-201ENST00000514947 1732 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL592429.1-201ENST00000403909 1473 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC027279.1-201ENST00000568885 4284 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 RNA5SP273-201ENST00000362484 113 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 DPPA2P2-201ENST00000418220 897 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 CHEK2P5-201ENST00000423877 246 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC021876.1-201ENST00000425959 359 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 VN1R110P-201ENST00000438988 971 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 OR52Y1P-201ENST00000452418 828 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC118282.1-201ENST00000506408 765 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC026782.2-201ENST00000510845 636 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC010374.2-201ENST00000512933 535 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 RNA5SP438-201ENST00000516561 112 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 SCARNA1-201ENST00000517138 166 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 WBP1LP3-201ENST00000523033 208 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC091078.2-201ENST00000557145 559 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC092121.1-201ENST00000569452 202 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 BNIP3P31-201ENST00000604515 566 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 MIR6768-201ENST00000610734 72 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC096708.4-201ENST00000620563 552 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 AC022325.1-201ENST00000502748 2199 ntBASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSX2IPQ9Y2D8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 AL161912.4-201ENST00000623889 2468 ntBASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SSX2IPQ9Y2D8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms