Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 RNU6-943P-201ENST00000516960 98 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 CYCSP38-201ENST00000559840 322 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AC026979.4-201ENST00000606555 645 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 AC024884.1-201ENST00000620583 399 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 MTCO1P28-201ENST00000574177 1528 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 CDY11P-201ENST00000447168 1651 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP29Q9HBJ7 MTND4P9-201ENST00000507819 1346 ntBASIC6.23□□□□□ -1.41
USP29Q9HBJ7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LYARP1-201ENST00000436977 1501 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 RNU4-39P-201ENST00000362455 127 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 CCNB2P1-201ENST00000399411 1150 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 RN7SKP166-201ENST00000410812 305 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 RN7SKP144-201ENST00000411108 279 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 SFR1P2-201ENST00000421841 730 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 MTCYBP32-201ENST00000427945 1084 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 OR3D1P-201ENST00000438288 955 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC084754.1-201ENST00000463466 464 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC124945.1-201ENST00000485133 188 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 CCDC11P1-201ENST00000503137 1162 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 TOMM22P4-201ENST00000511318 336 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AL158211.1-201ENST00000566763 763 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC090826.1-203ENST00000569235 490 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AP005136.2-201ENST00000583253 1049 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC096861.1-201ENST00000616652 240 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC008147.4-201ENST00000617570 1204 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC005899.7-201ENST00000618199 588 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AP006248.3-201ENST00000623580 594 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC090772.4-201ENST00000623599 362 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AL132656.3-201ENST00000606384 1595 ntBASIC6.22□□□□□ -1.41
USP29Q9HBJ7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.22□□□□□ -1.41
USP29Q9HBJ7 AC025470.1-201ENST00000510053 2032 ntBASIC6.21□□□□□ -1.41
USP29Q9HBJ7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
USP29Q9HBJ7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
USP29Q9HBJ7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
USP29Q9HBJ7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 SNORD1C-201ENST00000363315 78 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC245096.1-201ENST00000413104 546 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC073508.1-201ENST00000428866 656 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.21□□□□□ -1.42
USP29Q9HBJ7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.21□□□□□ -1.42
USP29Q9HBJ7 SDC4P-201ENST00000453285 601 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms