Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MTND5P31-201ENST00000419366 1374 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 TMSB4XP2-201ENST00000335179 210 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 Y_RNA.169-201ENST00000363745 96 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 OR4K6P-201ENST00000416478 897 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC073900.1-201ENST00000429766 776 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 RPL7P29-201ENST00000437151 728 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AL161626.1-201ENST00000441480 490 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC079781.1-201ENST00000441505 394 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 EXTL2P1-201ENST00000446218 416 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC233982.1-201ENST00000451247 436 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 NPM1P13-201ENST00000452663 865 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 RPSAP7-201ENST00000456871 885 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 PRDX3P4-201ENST00000470828 747 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 RPL23AP37-201ENST00000479658 549 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC104108.1-201ENST00000509930 412 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC138938.1-201ENST00000515431 782 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 NPIPB14P-203ENST00000532298 987 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 OR7E161P-201ENST00000533722 967 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC135279.1-201ENST00000543493 504 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 COX6CP16-201ENST00000603667 216 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC069304.3-201ENST00000603938 1084 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC080013.6-201ENST00000606185 215 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC091768.1-201ENST00000609258 930 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC100847.1-201ENST00000611316 481 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 ZNF663P-202ENST00000641770 1131 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 ATP5BP1-201ENST00000411980 1574 ntBASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM55Q9BYV6 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AC104454.1-201ENST00000421341 1401 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 OR2M1P-201ENST00000318104 951 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 MIR137-201ENST00000385223 102 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 ERHP2-201ENST00000402323 299 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL136131.1-201ENST00000406079 803 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL590084.1-201ENST00000407885 387 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 RN7SKP222-201ENST00000410651 315 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL157698.1-201ENST00000415190 1011 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 PTCD2P2-201ENST00000415579 1095 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 RPF2P1-201ENST00000424137 906 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AL022324.2-201ENST00000434827 780 ntBASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM55Q9BYV6 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms