Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 MIR4260-201ENST00000583107 67 ntBASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 AL021707.7-201ENST00000607991 416 ntBASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 AC007683.2-201ENST00000624681 714 ntBASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 MFSD8-239ENST00000641590 2479 ntBASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RPAP1Q9BWH6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AC113412.1-201ENST00000425840 504 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AL627308.1-201ENST00000435693 821 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AL133445.1-201ENST00000467051 452 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 SIAH1P1-201ENST00000479411 923 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 NRBF2P4-201ENST00000520874 850 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 HMGB1P42-201ENST00000532126 553 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 MIR6798-201ENST00000612887 67 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 AL049634.1-201ENST00000453770 1720 ntBASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.29
RPAP1Q9BWH6 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 AL034546.1-201ENST00000623740 3693 ntBASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RPAP1Q9BWH6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 SNORA58B-201ENST00000364259 136 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 FMO7P-201ENST00000436045 768 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC109481.1-201ENST00000509173 282 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC074255.1-201ENST00000511259 501 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 SNORA43.3-201ENST00000517240 103 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC004808.2-201ENST00000627965 773 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC015799.1-201ENST00000622996 3122 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC140134.1-201ENST00000511830 3544 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AP000432.2-201ENST00000624164 2048 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC089998.1-201ENST00000548575 3141 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 TNPO1P1-201ENST00000423641 1138 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 RNU1-88P-201ENST00000459274 128 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC079080.1-201ENST00000479841 822 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 AC060780.2-201ENST00000589047 198 ntBASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.95□□□□□ -1.3
RPAP1Q9BWH6 NANOGP3-201ENST00000605855 286 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms