Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RPS3AP49-201ENST00000472161 790 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC005412.2-201ENST00000492004 341 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 RPL19P11-201ENST00000495944 589 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RN7SL284P-201ENST00000498823 275 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC114324.2-202ENST00000503812 134 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC112518.2-201ENST00000508565 425 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 PRELID3BP5-201ENST00000508612 460 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC106800.3-201ENST00000511389 308 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 MORF4L1P3-201ENST00000525966 950 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AP003066.2-201ENST00000529375 555 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC004923.2-201ENST00000529649 369 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 MIR4732-201ENST00000581873 76 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 MIR212-201ENST00000586026 110 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RPL12P48-201ENST00000605620 304 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AP005229.2-201ENST00000609980 697 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 OR5AC4P-202ENST00000642086 985 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC011815.2-201ENST00000618230 2021 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 RN7SKP81-201ENST00000365603 331 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AL121835.1-201ENST00000404250 354 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 TCEA1P2-201ENST00000420496 906 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AL606495.1-201ENST00000422100 813 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 RPL12P16-201ENST00000431098 498 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AL022237.1-201ENST00000446663 358 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 CCNJP1-201ENST00000450600 1149 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC019084.1-201ENST00000457337 432 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC012123.2-201ENST00000485809 248 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 PPM1AP1-201ENST00000502740 1135 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC093720.1-201ENST00000505681 714 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC121161.1-201ENST00000510606 652 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC111000.6-201ENST00000514471 709 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 RN7SKP287-201ENST00000516546 266 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AP001636.2-201ENST00000525517 696 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 OR4A17P-201ENST00000526032 904 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 OR4A41P-201ENST00000533053 928 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 OR9G2P-201ENST00000533326 880 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AP001357.1-201ENST00000586304 1053 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AP001160.4-201ENST00000596971 382 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC093424.1-201ENST00000604999 338 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 AC126544.2-201ENST00000625174 749 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
SNX18Q96RF0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX18Q96RF0 AP005435.3-201ENST00000531260 3198 ntBASIC5.76□□□□□ -1.49
SNX18Q96RF0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms