Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TRIM60P17-201ENST00000415181 719 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC079809.1-201ENST00000415468 276 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 ARAFP1-201ENST00000422172 605 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 PSMD10P2-201ENST00000432890 672 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC094019.1-201ENST00000434678 472 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC245291.3-201ENST00000443400 292 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 RPL12P39-201ENST00000455456 496 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 RBMY2HP-201ENST00000457961 720 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 OR7E157P-201ENST00000494376 911 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 OR7E99P-201ENST00000505750 922 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 RN7SKP288-201ENST00000516227 268 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AP002981.1-201ENST00000517692 975 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AP004609.2-201ENST00000532177 190 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 RPSAP75-201ENST00000605848 301 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AL133481.2-203ENST00000607558 139 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 U91328.4-201ENST00000608919 517 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 GAPDHP41-201ENST00000613707 975 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC211486.4-201ENST00000621495 113 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 AC089999.3-201ENST00000622440 577 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 SNX18P12-201ENST00000624821 759 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 AL078621.3-201ENST00000623707 2042 ntBASIC5.22□□□□□ -1.57
RFT1Q96AA3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RFT1Q96AA3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFT1Q96AA3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
RFT1Q96AA3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RFT1Q96AA3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.21□□□□□ -1.57
RFT1Q96AA3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
RFT1Q96AA3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RFT1Q96AA3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.57
RFT1Q96AA3 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 RNU1-146P-201ENST00000364015 165 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFT1Q96AA3 RNA5SP296-201ENST00000410523 111 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 RN7SKP144-201ENST00000411108 279 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 MAPRE1P3-201ENST00000435438 796 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 FRG2FP-204ENST00000453982 852 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 AC239798.3-201ENST00000454459 408 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 AC019084.1-201ENST00000457337 432 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 ACA64.4-201ENST00000459070 127 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.21□□□□□ -1.58
RFT1Q96AA3 OR11I1P-201ENST00000486033 954 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 RPL34P33-201ENST00000486062 334 ntBASIC5.21□□□□□ -1.58
RFT1Q96AA3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms