Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 SNORA21-201ENST00000362423 132 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 U3.10-201ENST00000364459 214 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 RNA5SP211-201ENST00000365516 117 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 MORF4L1P7-201ENST00000426038 703 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL645931.1-201ENST00000439737 410 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC006326.1-201ENST00000445465 787 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC104164.1-201ENST00000460282 590 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 NPM1P17-201ENST00000479221 602 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC093719.1-201ENST00000480427 441 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC090058.1-201ENST00000498788 435 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC098862.1-201ENST00000504991 413 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 HMGB1P47-201ENST00000511281 589 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 HMGN1P17-201ENST00000513734 295 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 CR383658.1-201ENST00000514609 734 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC090424.1-201ENST00000535243 736 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 NDUFB9P1-201ENST00000604683 510 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC022001.1-201ENST00000605193 268 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL645933.2-201ENST00000606743 1207 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL080312.2-201ENST00000613001 630 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC025016.1-201ENST00000616746 682 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AL357562.1-201ENST00000624911 609 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 AC093297.3-201ENST00000607056 2517 ntBASIC6.17□□□□□ -1.42
ATG4AQ8WYN0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RNU6-792P-201ENST00000363490 107 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RNU6-1331P-201ENST00000363658 106 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 PSMA6P1-201ENST00000400275 741 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AL139805.1-201ENST00000407837 289 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RPS3AP25-201ENST00000411660 793 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RPL35AP31-201ENST00000418340 337 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 MTCO1P45-201ENST00000431457 267 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RPS12P17-201ENST00000438591 377 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RPL12P49-201ENST00000441100 121 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC002553.3-201ENST00000453002 341 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AL603882.1-201ENST00000463059 681 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 RPS7P10-201ENST00000464254 603 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 NAMPTP2-201ENST00000505629 1115 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 YWHAZP1-201ENST00000556286 722 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 BNIP3P38-201ENST00000601117 544 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC091057.3-201ENST00000602684 733 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC068620.3-201ENST00000602749 560 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 HMGB1P51-201ENST00000605166 638 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AL352984.2-201ENST00000611153 546 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC004477.3-201ENST00000614061 590 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AC012676.3-201ENST00000614983 479 ntBASIC6.16□□□□□ -1.42
ATG4AQ8WYN0 AL356752.1-201ENST00000615844 593 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms