Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 MIR1282-201ENST00000408865 101 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 VN1R51P-201ENST00000411675 945 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL121882.1-201ENST00000422893 417 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 RARRES2P3-201ENST00000457739 473 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 RN7SL568P-201ENST00000493069 298 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 OR8G5-201ENST00000524943 1041 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC084851.2-201ENST00000530377 364 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC087894.1-201ENST00000538359 518 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL121579.2-201ENST00000555466 590 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 RN7SL475P-201ENST00000583379 298 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC027334.1-201ENST00000603257 310 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC084373.1-201ENST00000603311 235 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC114477.1-201ENST00000605097 605 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC006213.6-201ENST00000623722 4179 ntBASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.08□□□□□ -1.44
SIMC1Q8NDZ2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC110792.3-201ENST00000595906 1614 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 SNORD35A-201ENST00000363389 86 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL034403.1-201ENST00000399414 885 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL359885.1-201ENST00000415786 903 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 RPL12P28-201ENST00000430852 489 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 OR6R1P-201ENST00000431838 940 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC242426.1-201ENST00000435270 960 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 BX679664.2-201ENST00000439282 283 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 CDY12P-201ENST00000440679 1015 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL513321.1-201ENST00000441175 761 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 GAPDHP37-201ENST00000442317 968 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 CDY13P-201ENST00000445813 1015 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL020997.1-201ENST00000446554 349 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC093166.3-201ENST00000448785 303 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC118758.1-202ENST00000454719 225 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC015524.1-201ENST00000491585 472 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 NPM1P35-201ENST00000533043 868 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC009729.1-201ENST00000548873 1133 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 RN7SL208P-201ENST00000577964 296 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AC005242.1-201ENST00000585658 438 ntBASIC6.07□□□□□ -1.44
SIMC1Q8NDZ2 AP001357.1-201ENST00000586304 1053 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms