Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ZNF549Q6P9A3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 PARP4P2-201ENST00000446672 3326 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC239868.2-201ENST00000564237 4527 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 COX6B1P3-201ENST00000312310 260 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RNA5SP514-201ENST00000363717 111 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RNU1-65P-201ENST00000363919 148 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RSL24D1P1-201ENST00000404972 493 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC099535.1-201ENST00000408928 371 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 CRIP1P1-201ENST00000427567 185 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 GAPDHP48-201ENST00000436626 961 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC015983.1-201ENST00000441577 373 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC023141.8-201ENST00000442554 208 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RPS15AP29-201ENST00000445539 400 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 CFL1P4-201ENST00000451536 498 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC093166.4-201ENST00000457867 318 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC128716.1-201ENST00000475129 166 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AL133372.1-201ENST00000493565 745 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RN7SL649P-201ENST00000496974 275 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 OR8X1P-201ENST00000534542 869 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC006512.2-201ENST00000543250 486 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 CYCSP38-201ENST00000559840 322 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 MIR4776-2-201ENST00000580204 80 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC008507.3-201ENST00000585753 472 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC090236.2-201ENST00000587933 1101 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC060780.2-201ENST00000589047 198 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 OR7A8P-201ENST00000595427 913 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AL513327.3-201ENST00000602618 469 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 BNIP3P19-201ENST00000605397 577 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC016590.3-201ENST00000611171 753 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC016597.2-201ENST00000613256 341 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 WBP1LP8-201ENST00000617401 327 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC022960.3-201ENST00000619794 441 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 AC069542.2-201ENST00000624816 216 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 LYARP1-201ENST00000436977 1501 ntBASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ZNF549Q6P9A3 MTND4P9-201ENST00000507819 1346 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 RNA5SP273-201ENST00000362484 113 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 RNU6-925P-201ENST00000384629 104 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 RNA5SP91-201ENST00000390902 119 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC016739.1-201ENST00000405359 345 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 MTCO2P17-201ENST00000424336 677 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC074367.1-201ENST00000438685 1125 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 VN1R110P-201ENST00000438988 971 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AMYP1-201ENST00000440059 1023 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 PDCL3P4-201ENST00000489621 720 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 HMGN1P15-201ENST00000513870 295 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 SNORD116-30-201ENST00000516468 85 ntBASIC5.77□□□□□ -1.49
ZNF549Q6P9A3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms