Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC017104.2-201ENST00000417000 321 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 MCFD2P1-201ENST00000417812 300 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 VDAC1P2-201ENST00000423609 850 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 SRIP2-201ENST00000428470 166 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 FABP5P14-201ENST00000437273 393 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 PCNPP5-201ENST00000452246 481 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 HMGN2P25-201ENST00000486956 268 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC008799.1-201ENST00000495909 457 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC048346.1-201ENST00000510247 144 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 RNA5SP401-201ENST00000515920 127 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 RNU6-445P-201ENST00000516949 107 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 PSMA2P1-201ENST00000526365 646 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AP000790.1-201ENST00000528891 737 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 RBM22P12-201ENST00000567098 1255 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC093063.1-201ENST00000599317 363 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 PRELID3BP8-201ENST00000604148 295 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AL358335.3-201ENST00000604678 327 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 APOOP1-201ENST00000604695 592 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC004805.2-201ENST00000605382 482 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.73□□□□□ -1.01
VARS2Q5ST30 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
VARS2Q5ST30 AC008124.1-201ENST00000609803 9730 ntBASIC8.73□□□□□ -1.01
VARS2Q5ST30 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC107398.3-201ENST00000562284 7000 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC012618.3-205ENST00000637896 1496 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 RNA5SP161-201ENST00000363871 115 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 RNA5SP240-201ENST00000365355 128 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 RNU4-2-201ENST00000365668 141 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 MDM4-202ENST00000367180 547 ntTSL 3 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 CST13P-201ENST00000376992 428 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 RPL7P25-201ENST00000404151 721 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 RNU6-575P-201ENST00000411326 105 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 RBMY2FP-202ENST00000420346 1263 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AL451054.2-201ENST00000420896 202 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 RBM6-203ENST00000421682 684 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 RPS7P14-201ENST00000426405 583 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC093151.1-201ENST00000427711 313 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 PRPS1P2-201ENST00000430496 937 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 PHBP4-201ENST00000437447 837 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 HMGB1P12-201ENST00000438594 598 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC005840.2-201ENST00000447193 355 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC113208.1-201ENST00000497944 318 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 SUMO2P17-201ENST00000504438 285 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 NMNAT1P4-201ENST00000505598 840 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC067942.3-201ENST00000512025 362 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 Y_RNA.672-201ENST00000516289 104 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 RN7SKP31-201ENST00000516354 278 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 SNORD60.2-201ENST00000516883 86 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 NIFKP8-201ENST00000560500 874 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC091304.5-201ENST00000568969 158 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 MIR3689F-201ENST00000579617 66 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC090236.2-201ENST00000587933 1101 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AL022345.1-201ENST00000607292 135 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC096861.1-201ENST00000616652 240 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC134981.1-201ENST00000628076 348 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.72□□□□□ -1.01
VARS2Q5ST30 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
VARS2Q5ST30 ZNF710-AS1-202ENST00000620791 2133 ntBASIC8.72□□□□□ -1.01
VARS2Q5ST30 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms