Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 ARMC4P1-201ENST00000438905 707 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 CEACAMP11-201ENST00000455211 583 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC093719.1-201ENST00000480427 441 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC103833.1-201ENST00000517442 172 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC020916.2-201ENST00000591242 360 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 MTCO3P22-201ENST00000603219 784 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 PPATP2-201ENST00000605635 508 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC084824.5-201ENST00000612009 413 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC089999.3-201ENST00000622440 577 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AP006248.3-201ENST00000623580 594 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC021766.1-201ENST00000624404 741 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL133243.2-201ENST00000610331 1621 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 AC138907.8-201ENST00000623981 2256 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AL157702.1-201ENST00000398764 426 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 USP24P1-201ENST00000433802 779 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 MTCYBP29-201ENST00000436327 1006 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC234771.2-201ENST00000445718 597 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AL445991.1-201ENST00000450381 475 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC124891.1-201ENST00000536322 519 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 TDGP1-201ENST00000543961 1229 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 NOP56P3-201ENST00000549457 385 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC233266.2-201ENST00000567067 528 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC135178.6-201ENST00000605314 398 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC004775.1-201ENST00000607389 753 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC019131.2-201ENST00000609071 870 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 AL445493.3-201ENST00000619568 477 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC38Q502W7 OR7A1P-202ENST00000641542 1158 ntBASIC6.3□□□□□ -1.4
CCDC38Q502W7 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC38Q502W7 KARSP1-201ENST00000451871 1752 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms