Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 RPL34P6-201ENST00000432390 345 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 LINC02210-201ENST00000444561 288 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC063955.1-201ENST00000462872 685 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 RPL12P30-201ENST00000488389 499 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 MIR212-201ENST00000586026 110 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AL080312.2-201ENST00000613001 630 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 MIR6736-201ENST00000616799 59 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AL035661.1-201ENST00000620459 1144 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AC073488.6-201ENST00000632293 754 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AP004607.3-201ENST00000530354 3915 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AL731532.2-201ENST00000623542 1953 ntBASIC5.11□□□□□ -1.59
CCDC58Q4VC31 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC011933.2-201ENST00000578539 2790 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 PSMA6P1-201ENST00000400275 741 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC096921.1-201ENST00000411661 375 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 THEM7P-201ENST00000419556 672 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL589765.3-201ENST00000446084 462 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL445466.1-201ENST00000448432 357 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 PSAT1P4-201ENST00000466500 526 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 RPS7P6-201ENST00000485777 579 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC131935.1-201ENST00000524621 333 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC137627.1-201ENST00000545761 289 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 SMIM12P1-201ENST00000603004 274 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 RPSAP75-201ENST00000605848 301 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 U91328.4-201ENST00000608919 517 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL162574.1-201ENST00000615702 950 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 RFPL4AP6-201ENST00000616792 846 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 RBPJP2-201ENST00000618187 1444 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 MIR6829-201ENST00000620375 67 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AP001962.1-201ENST00000624114 559 ntBASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC58Q4VC31 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC58Q4VC31 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms