Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC060780.2-201ENST00000589047 198 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC063977.5-201ENST00000601044 974 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC002069.2-201ENST00000603580 883 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC100767.2-201ENST00000604840 693 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 HIRAP1-201ENST00000605318 787 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3AP84243 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 NEPNP-201ENST00000404786 1371 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3AP84243 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
H3F3AP84243 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3AP84243 AL132656.3-201ENST00000606384 1595 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3AP84243 MIR1282-201ENST00000408865 101 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 RNGTTP1-201ENST00000420965 728 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 AC127526.2-201ENST00000426436 775 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3AP84243 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 RPL12P39-201ENST00000455456 496 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3AP84243 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3AP84243 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3AP84243 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.13□□□□□ -1.59
H3F3AP84243 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3AP84243 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3AP84243 AC079600.1-201ENST00000550326 297 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3AP84243 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3AP84243 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3AP84243 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.13□□□□□ -1.59
H3F3AP84243 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.13□□□□□ -1.59
H3F3AP84243 AL035661.1-201ENST00000620459 1144 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3AP84243 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.13□□□□□ -1.59
H3F3AP84243 KYNUP3-201ENST00000574386 1341 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3AP84243 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 AC106872.5-201ENST00000508856 1416 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.13□□□□□ -1.59
H3F3AP84243 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
H3F3AP84243 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3AP84243 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.13□□□□□ -1.59
H3F3AP84243 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H3F3AP84243 AC007842.1-201ENST00000597336 2039 ntBASIC5.13□□□□□ -1.59
H3F3AP84243 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
H3F3AP84243 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
H3F3AP84243 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 OR13C1P-202ENST00000641378 2919 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
H3F3AP84243 RN7SKP15-201ENST00000364742 309 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 RNU1-136P-201ENST00000384181 164 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 MIR130A-201ENST00000385274 89 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 SNORA11.5-201ENST00000408163 128 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 EEF1B2P8-201ENST00000414101 671 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 METTL15P3-201ENST00000415522 1221 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.12□□□□□ -1.59
H3F3AP84243 NENFP1-201ENST00000419476 466 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AC093155.2-201ENST00000420734 937 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AKR1B10P1-201ENST00000425765 942 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AL590399.2-201ENST00000427536 309 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.12□□□□□ -1.59
H3F3AP84243 AC144530.1-201ENST00000452862 555 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.12□□□□□ -1.59
H3F3AP84243 RPS23P2-201ENST00000463671 415 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 AC022215.1-201ENST00000481770 362 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 RPS3AP15-201ENST00000483874 781 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 RPL32P33-201ENST00000487023 394 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H3F3AP84243 SNORA70.11-201ENST00000515987 138 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 SNORA70.13-201ENST00000516116 138 ntBASIC5.12□□□□□ -1.59
H3F3AP84243 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.12□□□□□ -1.59
H3F3AP84243 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.12□□□□□ -1.59
H3F3AP84243 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.12□□□□□ -1.59
H3F3AP84243 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms