Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 RN7SKP124-201ENST00000364730 341 ntBASIC4.79□□□□□ -1.64
LMO4P61968 OR6K3-202ENST00000368146 996 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AL589994.1-201ENST00000404962 340 ntBASIC4.79□□□□□ -1.64
LMO4P61968 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 TNPO1P1-201ENST00000423641 1138 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.79□□□□□ -1.64
LMO4P61968 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 RPL34P27-201ENST00000428810 349 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AP000949.1-201ENST00000438328 629 ntBASIC4.79□□□□□ -1.64
LMO4P61968 NDUFA5P8-201ENST00000449019 346 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.79□□□□□ -1.64
LMO4P61968 RN7SL72P-201ENST00000460697 269 ntBASIC4.79□□□□□ -1.64
LMO4P61968 RN7SL570P-201ENST00000484405 292 ntBASIC4.79□□□□□ -1.64
LMO4P61968 RN7SL629P-201ENST00000489622 285 ntBASIC4.79□□□□□ -1.64
LMO4P61968 RPS26P24-201ENST00000497656 331 ntBASIC4.79□□□□□ -1.64
LMO4P61968 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.79□□□□□ -1.64
LMO4P61968 DUTP7-201ENST00000507982 486 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 COL6A4P2-205ENST00000509855 506 ntBASIC4.79□□□□□ -1.64
LMO4P61968 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 NPM1P21-201ENST00000513394 762 ntBASIC4.79□□□□□ -1.64
LMO4P61968 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 IGKV2-18-201ENST00000522607 343 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.79□□□□□ -1.64
LMO4P61968 AC025857.1-201ENST00000525252 377 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC078878.1-201ENST00000539832 958 ntBASIC4.79□□□□□ -1.64
LMO4P61968 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.79□□□□□ -1.64
LMO4P61968 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.79□□□□□ -1.64
LMO4P61968 AC096996.1-201ENST00000563813 325 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC010547.7-201ENST00000570323 333 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AC092474.3-201ENST00000603022 568 ntBASIC4.79□□□□□ -1.64
LMO4P61968 AP000864.1-201ENST00000609424 650 ntBASIC4.79□□□□□ -1.64
LMO4P61968 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 MRE11P1-201ENST00000464884 2127 ntBASIC4.79□□□□□ -1.64
LMO4P61968 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 GTF2IP4-201ENST00000453092 2054 ntBASIC4.79□□□□□ -1.64
LMO4P61968 LINC02019-201ENST00000608605 2060 ntBASIC4.79□□□□□ -1.64
LMO4P61968 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.79□□□□□ -1.64
LMO4P61968 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMO4P61968 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LMO4P61968 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LMO4P61968 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 AC117409.1-201ENST00000470499 1310 ntBASIC4.78□□□□□ -1.64
LMO4P61968 AL929601.4-201ENST00000613011 1341 ntBASIC4.78□□□□□ -1.64
LMO4P61968 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
LMO4P61968 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LMO4P61968 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LMO4P61968 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LMO4P61968 AL360271.1-201ENST00000395679 510 ntBASIC4.78□□□□□ -1.64
LMO4P61968 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 AC113412.1-201ENST00000425840 504 ntBASIC4.78□□□□□ -1.64
LMO4P61968 FMO7P-201ENST00000436045 768 ntBASIC4.78□□□□□ -1.64
LMO4P61968 AC015983.1-201ENST00000441577 373 ntBASIC4.78□□□□□ -1.64
LMO4P61968 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.78□□□□□ -1.64
LMO4P61968 OR52Y1P-201ENST00000452418 828 ntBASIC4.78□□□□□ -1.64
LMO4P61968 MTND2P3-201ENST00000452458 470 ntBASIC4.78□□□□□ -1.64
LMO4P61968 RNU1-88P-201ENST00000459274 128 ntBASIC4.78□□□□□ -1.64
LMO4P61968 AC104849.1-201ENST00000462623 405 ntBASIC4.78□□□□□ -1.64
LMO4P61968 RPS3AP15-201ENST00000483874 781 ntBASIC4.78□□□□□ -1.64
LMO4P61968 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.78□□□□□ -1.64
LMO4P61968 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.78□□□□□ -1.64
LMO4P61968 AC244502.2-201ENST00000543361 851 ntBASIC4.78□□□□□ -1.64
LMO4P61968 MTND2P17-201ENST00000550281 688 ntBASIC4.78□□□□□ -1.64
LMO4P61968 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.78□□□□□ -1.64
LMO4P61968 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.78□□□□□ -1.64
LMO4P61968 AL049779.3-201ENST00000557141 606 ntBASIC4.78□□□□□ -1.64
LMO4P61968 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.78□□□□□ -1.64
LMO4P61968 AC007346.2-201ENST00000564816 892 ntBASIC4.78□□□□□ -1.64
LMO4P61968 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LMO4P61968 NPM1P45-201ENST00000583151 559 ntBASIC4.78□□□□□ -1.64
LMO4P61968 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.78□□□□□ -1.64
LMO4P61968 VN1R81P-201ENST00000602085 372 ntBASIC4.78□□□□□ -1.64
LMO4P61968 RPAP2P1-201ENST00000603626 1168 ntBASIC4.78□□□□□ -1.64
LMO4P61968 BX323046.1-201ENST00000610145 535 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms