Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH13P55290 AL139254.3-201ENST00000641097 674 ntBASIC5.69□□□□□ -1.5
CDH13P55290 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
CDH13P55290 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH13P55290 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH13P55290 AC087565.3-202ENST00000642085 1603 ntBASIC5.69□□□□□ -1.5
CDH13P55290 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH13P55290 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH13P55290 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH13P55290 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
CDH13P55290 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 CASC19-238ENST00000641523 1558 ntBASIC5.68□□□□□ -1.5
CDH13P55290 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 AC114774.1-201ENST00000507410 1770 ntBASIC5.68□□□□□ -1.5
CDH13P55290 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 AL589826.1-201ENST00000340697 249 ntBASIC5.68□□□□□ -1.5
CDH13P55290 MIR133A2-201ENST00000347538 102 ntBASIC5.68□□□□□ -1.5
CDH13P55290 RNA5SP453-201ENST00000362503 119 ntBASIC5.68□□□□□ -1.5
CDH13P55290 RN7SKP186-201ENST00000365371 303 ntBASIC5.68□□□□□ -1.5
CDH13P55290 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 MT-RNR1-201ENST00000389680 954 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AC087752.1-201ENST00000391360 558 ntBASIC5.68□□□□□ -1.5
CDH13P55290 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 CDY17P-201ENST00000414121 1282 ntBASIC5.68□□□□□ -1.5
CDH13P55290 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 AL512504.1-201ENST00000415494 778 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 CDY8P-201ENST00000428380 1279 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 RSL24D1P8-201ENST00000434442 492 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 BTBD7P2-201ENST00000441962 620 ntBASIC5.68□□□□□ -1.5
CDH13P55290 CDY20P-201ENST00000447528 1279 ntBASIC5.68□□□□□ -1.5
CDH13P55290 MTND6P5-201ENST00000448266 512 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 RN7SKP35-201ENST00000517210 151 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 AC104997.1-201ENST00000519761 717 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 OR4A41P-201ENST00000533053 928 ntBASIC5.68□□□□□ -1.5
CDH13P55290 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 HMGN2P47-201ENST00000559378 272 ntBASIC5.68□□□□□ -1.5
CDH13P55290 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 AC011500.1-201ENST00000601963 469 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AL021368.1-201ENST00000607490 540 ntBASIC5.68□□□□□ -1.5
CDH13P55290 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH13P55290 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 AC004801.6-201ENST00000616571 978 ntBASIC5.68□□□□□ -1.5
CDH13P55290 AL136228.1-201ENST00000622221 319 ntBASIC5.68□□□□□ -1.5
CDH13P55290 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDH13P55290 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 OR10AB1P-202ENST00000641219 1686 ntBASIC5.68□□□□□ -1.5
CDH13P55290 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH13P55290 AC092451.3-201ENST00000625067 1343 ntBASIC5.68□□□□□ -1.5
CDH13P55290 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH13P55290 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDH13P55290 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CDH13P55290 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CDH13P55290 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH13P55290 AL158152.1-201ENST00000602652 1435 ntBASIC5.67□□□□□ -1.5
CDH13P55290 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH13P55290 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 RN7SKP250-201ENST00000363924 321 ntBASIC5.67□□□□□ -1.5
CDH13P55290 MIR130B-202ENST00000385018 82 ntBASIC5.67□□□□□ -1.5
CDH13P55290 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH13P55290 TRIM60P17-201ENST00000415181 719 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH13P55290 FAM183DP-201ENST00000421987 399 ntBASIC5.67□□□□□ -1.5
CDH13P55290 ARAFP1-201ENST00000422172 605 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AL354766.1-201ENST00000423396 542 ntBASIC5.67□□□□□ -1.5
CDH13P55290 MRPS21P2-201ENST00000424704 264 ntBASIC5.67□□□□□ -1.5
CDH13P55290 ARL4AP4-201ENST00000434170 518 ntBASIC5.67□□□□□ -1.5
CDH13P55290 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH13P55290 RAB28P3-201ENST00000448325 597 ntBASIC5.67□□□□□ -1.5
CDH13P55290 MTND2P3-201ENST00000452458 470 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AC022336.1-201ENST00000475510 337 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AC098818.1-201ENST00000478593 252 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AC044810.1-201ENST00000480271 711 ntBASIC5.67□□□□□ -1.5
CDH13P55290 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms